Gene Francci3_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2800 
Symbol 
ID3904946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3298238 
End bp3299062 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID637880121 
Producthypothetical protein 
Protein accessionYP_481887 
Protein GI86741487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCT ACGAGACGTA CGACCTCGTC GATGTACCCC ATCGCGACCG TCCTGGACGC 
TGGGAGGAGA TCCTGGGCAG CGCGGTGACG CCATTCCACA CTGATGTTCC TCCAGGGCGA
TTACCCTACC GTGCCTCGAT TGAGCGTCGC TGGTTCGATG ACATCGCGCT GCTGGATATC
GCATGTGATC CGTGCAGGGG TGAACGTAGT CGAAATCTGA TCAGCCGGAC CAGCGAGGAC
AATATCGCGA TATTCTTCGC TACCGCTGGG ACTGAACGGC TTGCCATCGA GGACAAGAAG
ATTGTTGTCA CTCCAGGAAG CTTCGTCATC TGGAACAGCA TGCAAAAGGT GCGGTTCGAA
GTTGTCGAGC ACTTCCGCAA AATTACCCTG GTAATCCCGA GAGTGGCGCT GGAAGAGGTC
TTGGAGAGCC CGTGGTTGGA AGCCGACCTC GTGGTGGATG TGAACGCTCC CGCGATTAGG
TTGTTGCGCA GCTATGTCGC ATCACTTGCC GGCCTCCCGC ACGAGGTTCC CGCCCCCACC
ATAACGGCGG CCCGCAACGC GGCATTGGAG CTGGTGGCCG CGGCGGTGCG CCCCGAGGCC
ACGTTCACGA GTGCGATCAC TGGGGAAGCG CTGCGGCTCG CAGTGGAACG CTGGATAGCT
CGAAACCTTG GCCACCGCGA CGTCAGCGCC GCCGCGGCGG CCGCTGCGCA GTGTGTGTCT
GTCCGCACGC TGCAGCGCAG CTTCGCCGCG ACAGGAAACA GCTACAGCGC CGTCGTCCGC
TCCCAGCGAC TCGCACGAGC CCGCCGGGAC CTGATCGCAG GGTGA
 
Protein sequence
MRIYETYDLV DVPHRDRPGR WEEILGSAVT PFHTDVPPGR LPYRASIERR WFDDIALLDI 
ACDPCRGERS RNLISRTSED NIAIFFATAG TERLAIEDKK IVVTPGSFVI WNSMQKVRFE
VVEHFRKITL VIPRVALEEV LESPWLEADL VVDVNAPAIR LLRSYVASLA GLPHEVPAPT
ITAARNAALE LVAAAVRPEA TFTSAITGEA LRLAVERWIA RNLGHRDVSA AAAAAAQCVS
VRTLQRSFAA TGNSYSAVVR SQRLARARRD LIAG