| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2741 |
|---|
| Symbol | |
|---|
| ID | 3906452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3230035 |
|---|
| End bp | 3230712 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637880064 |
|---|
| Product | cyclic nucleotide-binding domain-containing protein |
|---|
| Protein accession | YP_481830 |
|---|
| Protein GI | 86741430 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.705936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATT CTGTCCGGCC TGCCCGGCGG GGAATGCAGG CTATCCTCGG CGACCGTCTC
TGGCAGGCGT TGTTGTCATG CGGTTCCCGG TGCCATTTCC GGTCGCGGCA GGTGCTGCTG
CGTCAGGGCG ATCCAGATGA TTTCCTGCTT CTGCTGACCA CCGGCCGGGT AAAGGTGGTG
CGCGTGGACG CGGAGGGCTC GGCCCTCCTG CTGGCGCTGC GCTCGCCCGG GGACATGATC
GGTGAGATGG CGCGAATCGG AACCGGACGC ACCGCCACGG TGCAGGCGAT CGATCGATGC
GAGGCGCATC GGGTCTCCGC CGCCACGCTC GACTCCTTCC TGCGGCGGCA CGGTGTTCAG
GGAGCGCTGG CTGACTACGT GGTGAGCAAG CTGTCCGAAA CGGTTCCCTA TCAGCATCAG
CTCGTGCATT TCTCGCCGCG GCAGCGGGTC GCCCGCCTGC TGTTGGAACT GGTCGCCCTC
GCCGGACCGG AGCTGCCCGA TCCGATGCGG GTGCCGTTCT CGCTCGATGC CGTCGCGGAG
TCCCTGGGAC TCGCCCGGAG CACGGTGGCC GCACATGTGG CGGCATTGCG AGAGGAACAG
GTGCTGAGGC CGGGGCCACG GCTCGCGGTG GCGGATATCT CACGGTTGCG GGCCGAGGTG
GGCATCACGA CCGGCTGA
|
|---|
| Protein sequence | MTNSVRPARR GMQAILGDRL WQALLSCGSR CHFRSRQVLL RQGDPDDFLL LLTTGRVKVV
RVDAEGSALL LALRSPGDMI GEMARIGTGR TATVQAIDRC EAHRVSAATL DSFLRRHGVQ
GALADYVVSK LSETVPYQHQ LVHFSPRQRV ARLLLELVAL AGPELPDPMR VPFSLDAVAE
SLGLARSTVA AHVAALREEQ VLRPGPRLAV ADISRLRAEV GITTG
|
|---|
| |