| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2714 |
|---|
| Symbol | |
|---|
| ID | 3904704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3199094 |
|---|
| End bp | 3199684 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637880038 |
|---|
| Product | tRNA-adenosine deaminase |
|---|
| Protein accession | YP_481804 |
|---|
| Protein GI | 86741404 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.227671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGTCA TACTAATCGA GACTTCCCAC AGCTTCCAGG CATTTCCCGC ACGTCACCCG
CACCCCTCCG AGGCCGGAAC TGCGCCGACA GGCACAATGG GTGCCGTGCC GATCCCCACC
GCCCAGTACG AACCGTGGAT GCGTCGTGCT CTCAAGCTGG CCACGACCCT CCCTGACCCC
GGAGCCGACG ACCCGCCGGT CGGGGCAGTC ATCTACGGAC CGGACGGGAC CGAGATCGCG
GCAGCACATC ACGACCGCGA ACGCACCGCG GATCCCACCG CCTACGCCGA GATCCTCGCG
CTCCGCCAGG CAGCCCAGGC GCTCGGAACC TGGCGCCTCA CCGACTGCAC CCTCGTAACC
ACCCTCGAAC CAGGCACCAT GTCTGCCGGC GCGATCGTCC TCGCCCGCAT ACCACGCCTC
ATCATCGGCA CCTGGGACAA ATACAACGGC GCGGTCTGCT CCCTCTGGGA CGTCGTGCGC
GACCGTCGTC TCAACCACTT CGTTGAAGTC ATCCCCGACG TGCTCAAGGA CGAGTGCGAC
GCCTTGCTCG ACTCCTACCT CGACTCGCCG AGCAACCTCG CCCGAGGCTG A
|
|---|
| Protein sequence | MVVILIETSH SFQAFPARHP HPSEAGTAPT GTMGAVPIPT AQYEPWMRRA LKLATTLPDP
GADDPPVGAV IYGPDGTEIA AAHHDRERTA DPTAYAEILA LRQAAQALGT WRLTDCTLVT
TLEPGTMSAG AIVLARIPRL IIGTWDKYNG AVCSLWDVVR DRRLNHFVEV IPDVLKDECD
ALLDSYLDSP SNLARG
|
|---|
| |