| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2680 |
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| Symbol | |
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| ID | 3904904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3166724 |
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| End bp | 3167413 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637880005 |
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| Product | transposase |
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| Protein accession | YP_481771 |
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| Protein GI | 86741371 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0345302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCTCGT GTGACGACGT TCCCGCCGCG GTGGTGGAAC CCACGGGCGC GGTGGTCGGC
CTGGATGTCG GGGTCGCGTC GTTGGTGACT ACCTCGAACG GCGACCACTA CGGCAACCCG
CGTTTCCTCG AACGGTCCGC CGAACGCCTT GCCGACGCGC AGCGAGACCT GTCCCGCAAG
AAGTGGGGCT CGAAGCGACG GAAGAAGGCC GTGGCACGGG TTGCGGCGCG GTCCCGCGCA
GTCGCCCGGC AGCGGGTCGA TCTCGCGAAC AAGACCGCGC TCGAACTCGT CCGCGACCAC
GACCTGATCG CCGTCGAAAA ACTTAACATC AAGAGTATGG TCAAGCGGGC CGCGCCCAAG
CCTGACCCCG ACCGGCCGGG AGCGTTCCTG CCCAACGGGC AGGCCGCCAA GACTGGGCTT
AACACGTCGA TCCTCGACGC CGGGTGGGGG GTGTTCTTCA ACGTGCCGCG TGCCAAGGCT
GAAAGCGCCG GGCGGACGGT TGTTGAGGTG AACGCCCGCC GCACCTGGGT GACCTGGGTG
GCGTCGGCGA ACCAGCGCAG CACGAGCACC GCCTGCTCAC GACTGGTGAG CTTCCGTTGT
CACCGCCCCC CTTCAGCCAC CCAGCCGCCT ACCGTCCGTG ATGCTCACGC AGAGCTATCG
ATCGTTGCGC GGAAAGGCTC ACTGAGGTGA
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| Protein sequence | MLSCDDVPAA VVEPTGAVVG LDVGVASLVT TSNGDHYGNP RFLERSAERL ADAQRDLSRK
KWGSKRRKKA VARVAARSRA VARQRVDLAN KTALELVRDH DLIAVEKLNI KSMVKRAAPK
PDPDRPGAFL PNGQAAKTGL NTSILDAGWG VFFNVPRAKA ESAGRTVVEV NARRTWVTWV
ASANQRSTST ACSRLVSFRC HRPPSATQPP TVRDAHAELS IVARKGSLR
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