| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2674 |
|---|
| Symbol | |
|---|
| ID | 3904898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3156969 |
|---|
| End bp | 3159209 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637879999 |
|---|
| Product | N-6 DNA methylase |
|---|
| Protein accession | YP_481765 |
|---|
| Protein GI | 86741365 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.559823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.558712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGGC TGCCGGTGAA GACCAGCGGC CGGGACACGG CGAGCTCCGC GGCTGTCACG
GCCACGGCCA CGGCCACGGC CACGGCCGCA GACACGGCCA CGGTCACCGC CACCGACATC
GCCCGGCTGG CCGGAGTCGG GCGGGCCGCG GTCAGTAACT GGCGGCGCCG GTTCGCCGAC
TTTCCCGCAC CCGTCGGGGG GACGTCGACC AGCCCGCTGT TCGCGCTGGC CTCCGTGGCG
GACTGGCTCG CCCGGCATGA CCGACCGTTC CAGGTCGAGG CGGCCGACCA GGTGTGGCAG
CGGATCCGGG GGGCCGTCGA TGATCCACGC CTCGGTGAGG TGACCGGCCA TCTCGGGGGT
TTCCTCATTT ATCGTCAGCG GGATCCCGCG GGCGCCACGG CACTGCTCGG GGAGAGCGAC
GCGGTGGCGG CCGTATCCCT GGAACCGGCG ATCGCCCGCG CCGTGCCGGA GCTTCCCGGT
GGTTTCCCCG ATACCTGGGA GACCGGGTGG GTGGCGATCG CCCGGGTCGC CGCCGAGGCG
GCGGACCGGC ACGGCCACGC GGAGCTCTTC GACGCGCTGC GCGCCCGCTA CCGCGAGGTC
TGCTCCCGGC AGGTGGCGGA GCCTCCGCGG GCGGTCGGGG AGCTGATGGT GACCCTCGCC
GGCCTGCGCG GCCGGTCGGG GGCCGCCACG GTGCTCGACC CGGCCTGCGG GATCGGCGGG
CTGTTGGAGG CCGCCCGGGC CGCGGGGGCG GGCCGCCTGC TCGGCCAGGA TGTCAACCCG
ACGATGGCGC GGGTGAGCGC CGTCGGACTG CTGCTGCGGG GTGGTGACGC GCGGATCGTC
GCGGGCGATT CGCTGCTCGC CGGCACCTTC GCCGGGGAAC GGGCCGACGC GGTCCTGTGC
GCCCCGCCGT TCGGGCAGCG TTCCTGGGGC TACGACGAGC TGCTCGGCGC GCCGTGGTGG
CGCCACGGTG TTCCACCGCG GGGGGAACCC GAGCTGGCCT GGGTGCAGTA CTGCCTGGCG
CACGCCCGGG ACGGCGCGCA GGTGCTGGTC ATCATGCCGG CGGCCGCCGC GTCGCGCCGT
GCCGGGCGCC GCATCAGGGC GAACCTGCTG CGCGCCGGGG AGTTGCGCGC CGTGCTGGGG
CTGCCGCCCG GTCTGTTCCC GGCGGGATCG GCCCCGGATC TGTGGGTGCT CCGCCGCGGG
GCCGGCCCCG ATGCCGGTGC CGGTTCCGAT GCCGGTGCCG GCGGGGCCGG GGCGACGCCC
GCTCAGGTGC TGCTGGGCCT GGCGCGCGAT GAGATCGCCG TCGTCGAAGC GGCCTGGGCG
TTGTTCGTCG CCGCTGGCGG GTTCGGCGGC GACACCGCCG CCCAGGCGGA CCAGGTGGCC
GACGACGCCG ATCTGCCGGC GGGATTCCGG CGGATATGCG TTGCGGACCT CCTCGACGAC
GAGGTCGACG TGAGCCCGCG ACGCTACATC GACCATCCTC CGGAAAGAAC CGCTGTCGGT
GAATTTCCCG CGGTCGGTGA ATTCCCCGCT GTCCGGGAGG ATTTCCTGGC GACGGTGGCC
TCGTTGTCCT CGGCGGTTCC CCTCCTGACC CCACCGAGGG GATCCGGACC GGCGGACCGG
CCGGCTTCGT TGAGCGTCAC GTCGAGCGTC ACGATCGGTG AGTTGGCAAA AGCCGGATCG
TTGACGATCC TGATGGCCCC GTTGCAGACC AGGGCCGGGG TCGGTGACCT GCCGTTGCTC
ACCGCGGGCG ATGTCCGGCA TGGGCGGGGC CCGTCGAGCC GGACGGAGGA ACTGGCCGGA
ATGCTCGTTC TCCGGCCCGG CGACGTCGTC TGTGTGACGG CGTCGGGGGA GAGCATGGCC
CGAGTCGTCG AGGACGCGGG CGCCGTTCTC GGGCCGCGGG TGGTGCTCCT GCGGGGCGAT
CCCGACCGGC TCGATCCGTA CTTCCTGGCC GGGATCCTGC GGGCGGCAGG CCATCGGGCG
CACGGGCGAT CCGGTGGTGG CGCGGATGCC CAGGCCGCCG GTCGCTCGGG TGGATCGTCG
CCGCGCGCCG ACCCGCGGCG GGTCCGGATA CCGGTTCTCC CGCTGGCCGA ACAGCGTTCC
CGGGGGCTCG ACTTCCAGCG CCTCACGATG GTCGAGAAGT CGCTGCGCAA CGCGGTGGAA
CTGGCCGAGA CCATCGTCCG GCTCGGTCAT CTCGGAATCG CCGACGGAAG CCTGCGGGGC
GGGGAGACAG GTCCCGGGTA A
|
|---|
| Protein sequence | MNGLPVKTSG RDTASSAAVT ATATATATAA DTATVTATDI ARLAGVGRAA VSNWRRRFAD
FPAPVGGTST SPLFALASVA DWLARHDRPF QVEAADQVWQ RIRGAVDDPR LGEVTGHLGG
FLIYRQRDPA GATALLGESD AVAAVSLEPA IARAVPELPG GFPDTWETGW VAIARVAAEA
ADRHGHAELF DALRARYREV CSRQVAEPPR AVGELMVTLA GLRGRSGAAT VLDPACGIGG
LLEAARAAGA GRLLGQDVNP TMARVSAVGL LLRGGDARIV AGDSLLAGTF AGERADAVLC
APPFGQRSWG YDELLGAPWW RHGVPPRGEP ELAWVQYCLA HARDGAQVLV IMPAAAASRR
AGRRIRANLL RAGELRAVLG LPPGLFPAGS APDLWVLRRG AGPDAGAGSD AGAGGAGATP
AQVLLGLARD EIAVVEAAWA LFVAAGGFGG DTAAQADQVA DDADLPAGFR RICVADLLDD
EVDVSPRRYI DHPPERTAVG EFPAVGEFPA VREDFLATVA SLSSAVPLLT PPRGSGPADR
PASLSVTSSV TIGELAKAGS LTILMAPLQT RAGVGDLPLL TAGDVRHGRG PSSRTEELAG
MLVLRPGDVV CVTASGESMA RVVEDAGAVL GPRVVLLRGD PDRLDPYFLA GILRAAGHRA
HGRSGGGADA QAAGRSGGSS PRADPRRVRI PVLPLAEQRS RGLDFQRLTM VEKSLRNAVE
LAETIVRLGH LGIADGSLRG GETGPG
|
|---|
| |