Gene Francci3_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2657 
Symbol 
ID3906330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3137456 
End bp3138226 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID637879982 
Productprecorrin 6A synthase 
Protein accessionYP_481748 
Protein GI86741348 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR02434] precorrin-6A synthase (deacetylating) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.14068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGA TCCTCGTCAT TGGCATCGGT GCCGGCGACC CCGACCAGCT GACGATCCAG 
GCCGTCAAGG CGCTGAATCG GGCCGACGTC TTCTTCGTCC TGGACAAGGG GGCGGCGAAG
GAGGACCTGG TCCGGCTGCG GCGGGAGATC CTCGACCGGC ACGTCGAGGG GAACGGCTAC
CGGATCGTCG AGGCCCGTGA CCCGAGCCGC GACCGGTCCT CGACGGACTA CACCGCCGCC
GTCGAGGACT GGCATTCCCG CCGGGCCGCA CTGTACGAGC GGATGATGCT CGACGAGCTG
GGCGAGGATG GCTGCGGGGC GTTCCTGGTC TGGGGTGATC CGTCGCTGTA CGACAGCACG
CTGCGCATCA TCGACCGGAT CGTGGCGCGG GGCGTGGTGC GGTTCGACTA CGAGGTGATC
CCGGGGATCA CCAGCGTGCA GGCGCTCGCC GCCCGCCACC GGCTGATCCT GAACCGGATC
GGCGGCCCGG TCGAGATCAC GACCGGTCGC CGGCTCGCCG CCGGATTCCC GCCGGGGGTC
GACGACGTCG TCGTCATGCT CGATGCCGAG AACACCTTCC TGACCCTGCC GGCCGACGAC
GTCGACATCT ACTGGGGCGC CTACCTCGGC ACCCCGGACG AGGTCCTGCT GCACGGTCCG
GTCGCCGAGG TCGGCGGGCT GATCGAGCGG ACCCGCGCCG AGGCCCGCGA GCGTAAAGGC
TGGATCATGG ATACCTACCT GCTCCGCCGC CGTGAGGAAA GTGGCCGGTG A
 
Protein sequence
MRTILVIGIG AGDPDQLTIQ AVKALNRADV FFVLDKGAAK EDLVRLRREI LDRHVEGNGY 
RIVEARDPSR DRSSTDYTAA VEDWHSRRAA LYERMMLDEL GEDGCGAFLV WGDPSLYDST
LRIIDRIVAR GVVRFDYEVI PGITSVQALA ARHRLILNRI GGPVEITTGR RLAAGFPPGV
DDVVVMLDAE NTFLTLPADD VDIYWGAYLG TPDEVLLHGP VAEVGGLIER TRAEARERKG
WIMDTYLLRR REESGR