| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2650 |
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| Symbol | |
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| ID | 3906323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3129337 |
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| End bp | 3131118 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637879975 |
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| Product | membrane protein-like |
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| Protein accession | YP_481741 |
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| Protein GI | 86741341 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5305] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.20544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.117814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGATG TCGCGGTCCG GCCGGCGGAG CAGATCCCCG AGCCGGTCGA CCAGGTCGGG
AACGCATCCG GCCGTGCGGG ACGGATCTTC ACCGCGGTGA TGGGAGTGCT CCTCGCCGTC
TCGGTGATCG TGCGGTTCAC CGCCAGCCAG GCACTCTGGC TGGACGAGGC GCAGAGCGTC
GCCATCGCCC GCCTGCCCCT GCGTGGGTCG GCCTTCACGA TGTGGGACGG CCTGCTACGG
GACGGCTCAC CGCCGTTGTA CTACCTGGTG CTCCACGGCT GGATCAAAGC GTTCGGCGAG
GGCACCTTCG CGGTCCGCTC CCTGTCCGCG CTGATCAACA TCGGTGCGGC GTGGCCGCTG
TTCCTGCTCG CCCGCCGCGT GGTCGGCGAG CGGGCGGCGC GGGTCAGCGT CGTGCTGTAC
CTCACGTCGC CGTTCGCGTT GTACTTCGGG ACCGAGACCC GGATGTACAG CCTCATCGTG
TTGCTCACCG CGTTGGGTGG ACTGGCGTTG GAGCGCGTCC TGCGGGCACC GTCGATCAGA
TCGACGATCG CCCTGGCGCT CTGCGCGGGA GGCCTGGCGC TGACCCATTA CTGGTGCCTC
TACCTGCTGC TCACGGTCGG AACGTGGCTG GTCCTGCTGC TGGTGGCCCG TCCGTGGTGG
GTCGCGCGCC AGATCCGGCG CGGGGCGGGC GCGGCGGACC CGGCGGGTGT GCCGGGCGGC
ATGACCGCCT CGGCGAACGA TCCGGGCCCG ACAGGTGTAC CCGGATACCG TTCCGCCCCG
GGAAGCCCGG GAAGCCGGGG CCGGGGCGCC CCCCACAGTC ACCGGACACC GACCCGTTTC
CTCACCCCGC AGCGGCGGGG GCCGGTCTTC GGGCTGCTCG GCATCGTCGG TGGCGGGCTG
GTCTTCGCCC CGTGGCTGCC CGACTTCTTC GACCAGCTTG CCCACACCGG CACCCCCTGG
GGCGAGCCCG CCAGCTATGC CGCGATCTCC CACGCCTACG GCCAGTGGGC CGGCGGCCCG
ACGACCCTGG GTCGCCTGTT GCTGTTCCTG ATCACCGGTC TCGCCGCCGC CGGCATCGCC
GGCCGGCCCG CGGGTAGCCG GTTCATCCTT CTCGATCTGC GTGGTCTCGA ACCGGGTCGG
ACCCTGTTCC TGCTGGCCAC CGGCACACTC GTCGTCGCGG TGACGGCGGG CAAGGTGGTC
GGCAACGCCT GGGCCGACCG GTACACCGCC ACCGCCTTCG TGCCGTTCCT GCTGGTCATC
GGGCTCGGCG CGACGATCAT CACCGATCGG CGGGTGTTCC ATGGAGTGGT CGCCGTCGCC
GCCCTGACCG GTCTGCTCGC CGGGACCTCC GACATCCACC GGGAGCGGAG CCAGGCCACC
GAGGCCGCGC AGGTCCTCGA GCGGACCGCC CGGCCCGGTG ATGTGATGCT GGTCTGCCCG
GACCAGCTCG GACCGGGCCT CGCCCGTACC GTGCCGAACT GGATGAAGGT GTACGTCGTG
CCGACCTACG CACCGCCGGA TCGGGTCGAC TGGGTCGACT ACGAGCAGCG CAACGAATCG
GCCAACGGGG TCGCGATCGC CCGGCGCGCC CTCGCCGAGG CCGGTCCGGA ACACACCGTC
TTTCTCGCCG GTTCCGGGTC ATACCGCACC TACGAGGAGC TGTGCACGGT GGTGCGCACC
ACCCTGCAGG AGGCCCGGCC ACTCGCGGAC GAGGTCATGA AGCAGGGTCT GCCGGCCAAG
GTCTACGAGA ACTACGCGCT GCTGCGGTTC CGGGCCTCTT GA
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| Protein sequence | MTDVAVRPAE QIPEPVDQVG NASGRAGRIF TAVMGVLLAV SVIVRFTASQ ALWLDEAQSV
AIARLPLRGS AFTMWDGLLR DGSPPLYYLV LHGWIKAFGE GTFAVRSLSA LINIGAAWPL
FLLARRVVGE RAARVSVVLY LTSPFALYFG TETRMYSLIV LLTALGGLAL ERVLRAPSIR
STIALALCAG GLALTHYWCL YLLLTVGTWL VLLLVARPWW VARQIRRGAG AADPAGVPGG
MTASANDPGP TGVPGYRSAP GSPGSRGRGA PHSHRTPTRF LTPQRRGPVF GLLGIVGGGL
VFAPWLPDFF DQLAHTGTPW GEPASYAAIS HAYGQWAGGP TTLGRLLLFL ITGLAAAGIA
GRPAGSRFIL LDLRGLEPGR TLFLLATGTL VVAVTAGKVV GNAWADRYTA TAFVPFLLVI
GLGATIITDR RVFHGVVAVA ALTGLLAGTS DIHRERSQAT EAAQVLERTA RPGDVMLVCP
DQLGPGLART VPNWMKVYVV PTYAPPDRVD WVDYEQRNES ANGVAIARRA LAEAGPEHTV
FLAGSGSYRT YEELCTVVRT TLQEARPLAD EVMKQGLPAK VYENYALLRF RAS
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