| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2647 |
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| Symbol | |
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| ID | 3906320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3123858 |
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| End bp | 3125708 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879972 |
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| Product | membrane protein-like |
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| Protein accession | YP_481738 |
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| Protein GI | 86741338 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5305] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.071566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.102983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGTAG ACGCATCCGG GAGTCCAACC GTCGGCCAGG ACACCGGATC CGGGCCGGCG
GTGCTCTCGG GTCCCCGCCG CCCCCAGGCG CCGGTGGACG TGACCGCGAC CGCGGTCGTG
GCCACAGCCG CGAACAGCGC CACAGCCGCG AACAGCGCCA CAGCCGCGAA CAGCGCCACA
GCCGCGAACA GCGCCACAGC CGCGAACAGC GCCACAGCCG CGAACAGCGC CACAGCCGAT
GTCACGACCG GGACGGTCAT CACGCCCGGG ACCGCGCGCA CGACCACCGC CGTGGCGCGG
ATCGCGGCGG CCAGCCCGCA GCTGCTGGTA GTCGCTGTCA TACTCGCCGT TGCCGCCGGC
GCGCTGATGC GGTTCGCCAC CCCCAGCCAT CTGTGGCTCG ACGAGTCGTT GACGGTCGCC
ATCGCCTCGC GCCCCGTCCC ACAGCTGCTC GACGCGCTGC GGCACGACGG CTCACCGCCG
CTGTACTACC TGCTGCTGCA CGCCTGGATC GCGGTGTTCG GCGACGGGGA CGTCGCCGTC
CGGGCGTTGT CCGGGGTGCT GTCGCTGGCG ACGCTGCCGG CGGCGTGGCT GGCCGGACGG
CGGGTGGGCC GGACGGCCTT CCAGGCCGGC AACGGTGGCC GCGACGCCGA CGCCTGGGTG
GGCTTGGCGA CCCTGCTGAT GTTCGCCTGC TCTCCCTACG CGATCCGCTA CGGCAGCGAG
ACGCGGATGT ACTCGCTGGT CGTCCTGTTG GTGCTGGTGT TCGGGCTCGC GACCGTGCGG
GCGCTGGAAC GCTCCGAGCC GGCACGGCTG GCGATGCTGA CGCTGGCGAC CGCCGCCCTC
GTCTACACCC ACTACTGGAC GTTCCTGCTG ATCTTCACCG TGGCGGCGTT CATGCTGCTA
CAGGCCCGGC GGCGACCCCA GTACCGGCAG GTGACCCTGC GGGCCTTCGC CGCGATGGCG
GCTTCCGCCG TGCTGTTCGC GCCGTGGATG CCGTCGTTCC TGTTCCAGAT GCTGCACACC
GGAACGCCCT GGGCGCCCAA GGTGCAGGCC CAGGTGCTGC TGGACACGGT CTTCGACTGG
GCCGGCCCGA CCTCCACCGG TGCGCTGCTC GGCATCGTGC TGCTCGGGGG CGCGCTCATC
GGCCTGACCG CGCGTCCGGA CGGGCGGGAG CTCGCGGTCA AGGTCTCCGG CCGGGTGCCG
GGCCGTTACC TGGCCGCGAT CTGGCTGGTC CCCCTCGTCC TGGCCTACTG CGTGAACATG
TTCGGCGGCA GCGCATATGC CGAGCGCTAC ACCGGCATCG CCCTGCCGGC CTGCCTGCTG
CTCGCCTCGC TCGGCATCGC CCAACTGCCG GGCCGGCGGG TGCGGGCCGG GGTACTGATC
GTCGCCTCGC TCAGCGGCCT GCTCGGCGGG TGGCAGCTCG CCCGGACCGA ACGCACCCAG
GCCGGGGAGA TCGCGGGCCG GATCGTCGCG CTGGCCCGGC CGGGAGACGT GGTCGCCTAC
TGCCCGGACC AGCTCGGCCC GGCCGTGCAC CGGGCAATCG AACGGCACGG CGAAGTCACG
GTACGGGAGA TCGTGTACGC GGACAGTTCC GGCCCGGCGC TCGTCGACTG GGTCGACTAC
GCCGACCGGA TGAAACGGGC GAACGGCACC AGCTTCGCGG CCGAGGTCAA CGAACTGGCC
GGCCCCGGCC ACGCCGTGCT GCTCGTCCGC GCGGACGGTT ACCGGTTCCT GGAGGGCGCC
TGCGCCGTGC TGTCCGACCA ACTCGCCACG CTGCGCGACC GCACCGTGCA GGTCGAGCGG
CGCAACCTGT ACGAGGGCGC GTCGCTGGAA CGGTTCTCCA CGCTGCGCTG A
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| Protein sequence | MNVDASGSPT VGQDTGSGPA VLSGPRRPQA PVDVTATAVV ATAANSATAA NSATAANSAT
AANSATAANS ATAANSATAD VTTGTVITPG TARTTTAVAR IAAASPQLLV VAVILAVAAG
ALMRFATPSH LWLDESLTVA IASRPVPQLL DALRHDGSPP LYYLLLHAWI AVFGDGDVAV
RALSGVLSLA TLPAAWLAGR RVGRTAFQAG NGGRDADAWV GLATLLMFAC SPYAIRYGSE
TRMYSLVVLL VLVFGLATVR ALERSEPARL AMLTLATAAL VYTHYWTFLL IFTVAAFMLL
QARRRPQYRQ VTLRAFAAMA ASAVLFAPWM PSFLFQMLHT GTPWAPKVQA QVLLDTVFDW
AGPTSTGALL GIVLLGGALI GLTARPDGRE LAVKVSGRVP GRYLAAIWLV PLVLAYCVNM
FGGSAYAERY TGIALPACLL LASLGIAQLP GRRVRAGVLI VASLSGLLGG WQLARTERTQ
AGEIAGRIVA LARPGDVVAY CPDQLGPAVH RAIERHGEVT VREIVYADSS GPALVDWVDY
ADRMKRANGT SFAAEVNELA GPGHAVLLVR ADGYRFLEGA CAVLSDQLAT LRDRTVQVER
RNLYEGASLE RFSTLR
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