| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2636 |
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| Symbol | |
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| ID | 3906309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3110962 |
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| End bp | 3113493 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879961 |
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| Product | hypothetical protein |
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| Protein accession | YP_481727 |
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| Protein GI | 86741327 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.605081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.364549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCG CCACCCTCAA GAGTCTGCTG GCCCGCAAGG TCCGGCTGGT GCTCTCCATG
CTGGCGGTCG TCGCCGGGGT GAGCTTCGTG ACCGGGACCC TGGTCCTGAC CGACACCCTC
AACCGGACGT TCGACACCCT CTTCGCCGAC ATCAACAAGA ACGTCAGCGT CGCCGTGCGC
TCGGTCAACG CCATCGACCC GACGAGCGAC GTCGGCCGCC CTCCGCTGCC GGCCTCGCTC
GTCTCCACCG CCGCCGGAGT GGACGGGGTG CGGGTGGCGG TCGGCAAGGT CAACGGCCAG
GCCGTCCTCG TCAACCCGGC CACCGGCAAG CCCTCGAACA CCAACGGTGC GCCGGGGATC
GGTATCAACT GGACCGGGGG TCAGCCCACC TCGGCGGAGG AGATCGCCGA GGGTCGCCCG
CCCGGCCCCG GAGAGATCGT CGTCGACCGG GCGACCGCGA AGAAGCTCCA TCTGTCGCTC
GGGGCAAAGA TCTCGGTGCA GACCAAGGGT CCGCCCGCGC GGTACACCCT GGTCGGCACC
TTCCGGATCG GCGGTCAGGA CAGTCTCGGG GGCGCCGCCG TCACCGCGTT CGACACCGCC
ACCGCCCAGC GGGTCCTGCT CGCGCCCGAC CGGTTCAGCG CGATCCACCT GGCCGCCGGG
CCCGGCCTGA CCCAGGAGGA GCTGCGGGCC CGGGTCGCCG CCGCACTCCC ACCGGGTGTC
GAGGCGATCA CCGGCAGGCA GTTGGCGGAC GAGAGCGCCA GCGCTGTGCA GAACGCCGTC
AGCGGCTTCT CCACCTTTCT GCTGATCTTC GCCGCCATCT CGGTCTTCGT TGGCGCCTTC
ATCATCTTCA ACACCTTCAC GATGCTCGTC GCCCAACGGG TGCGGGAGCT GGCCCTGCTG
CGAGCAATCG GGGCGAGCAA ACGTCAAGTC CAGGTGTCCC TGCAGGTCGA AGCGGCACTG
GTCGGCTTCG CCGGGGCCAC TGTCGGCCTG GTGTCCGGCG CGGGGCTCGC GCTGCTGCTG
CGCGTCGCCG TCGGTGTGTT CGGCGTGGCG CTGCCCAGCG GTGCGCTGGT CTTCCGCCCC
CGCACCGTCG TGATCGCCTA CGCCGTCGGC GTGCTCATCA CCGCCGCGGC GGCGTTCGTG
CCGGCCCGCA AGGCCGCGTC GGTGCCACCG ATCGCGGCGA TGCGGGAGAC CTACGTGCTG
CCGACCCGCT CGCTGCGCTC CCGGGCGATC GCCGGGTCGG TGCTCACCGC GCTCGGCATC
GTCCTGCTGA TCCTCGGCAC CGCCTCGGCG GGCAAGCCGG GAGCCACCGC CGTCGGGGTG
GGCGCGGCGG GGATCTTCCT CGGCGTCGCC ACCCTCTCAC CGCTGCTGTC CGGACCGATC
ACCCGGGTCC TCGGCGCACC GTTGGCGAGG ATGTTCGGGG CCACCGGCCG ACTCGGCCGG
GAGAACGCGA TGCGCAACCC GCGCCGGACC GCCTCCACCG CCTCCGCGTT GATGATCGGA
CTCGCCCTGG TCAGCGCCTT CTCCGTGCTC GGACAGTCGA TCAAGGAGTC GGTGCGGGAG
ACGGTGTCGA ACAGCCTCGG TGCCGACTTC TACCTGACCC CGCAGAACTT CGGGCAGGGA
TTCAGCGGTG AGGTGGCTCG CGAGCTGGCC GGCAAGCCCG GCATCGAGAT CGCCACGGGT
CTTCGGGGCG GCCTGGTGAA GATCTCCGGG CAGAGCTCCC AGGTGCTGGC CGGCGACCCA
GCGGGCCTGG TCAAGATGCT GGCCATCAAG GAGGTGACCG GTGACGTCCA CGCCCTCGGC
GACGGCACGA TCCTGGCCGA GGACTCCACC GCCGCGGACC ACCAGCTACG GGTGGGGCAG
AAGGTCCCGG TCACCTTCGC CGACGGCCGC GCGGAGCTGA CTCTGGTGGG CACCTACCAG
AAGAGCCAGG TGGCCGGCAA GTGGATCATC TCCACGAGCG AGTTCGCCCG GCACTCCACC
GATGACCTCG ACCTGTTCGT CCTGGTGAAG AGGGCGAGCG GGGCGGACCC GGCGATGGTC
CGGGCCGAGA TCGCCACGGT GGTCAAGTCG TTCGCCACGG TGGAGGTCCG GGACCAGTCC
GAGTTCGTCG CACAGCAGGA GAAGCAGGTC GACCAGCTGC TCGGGTTCAT CTACGTGCTG
CTGGCCCTGG CGGTCATCAT CGCACTGTTC GGTATCGTCA ACACCCTGGC GCTCTCGGTA
ATCGAACGGA CCCGGGAGAT CGGTCTGCTG CGTGCGGTCG GCATGACGCG GTCGCAGATG
AGGCTGATGG TCATCCTTGA ATCAGTGATC ATCTCGGTCT TCGGAGCCGT GCTGGGCGTC
GTCGTCGGGA GCATCTTCGG CTGGGCGCTG ACGAAGGCGC TGGCCTCCCT GGGAATCAGC
ACGTTCGCCT ACCCGGTACG GACGATCCTG CTCGTGGTCC TCACCGGGGC GATCCTCGGC
GTGCTCGCCG CTGTCTTCCC CGCCCGGCGC GCCGCTCGCA TGGACGTCCT GCGCGCCATC
TCCGCCGTCT GA
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| Protein sequence | MLRATLKSLL ARKVRLVLSM LAVVAGVSFV TGTLVLTDTL NRTFDTLFAD INKNVSVAVR
SVNAIDPTSD VGRPPLPASL VSTAAGVDGV RVAVGKVNGQ AVLVNPATGK PSNTNGAPGI
GINWTGGQPT SAEEIAEGRP PGPGEIVVDR ATAKKLHLSL GAKISVQTKG PPARYTLVGT
FRIGGQDSLG GAAVTAFDTA TAQRVLLAPD RFSAIHLAAG PGLTQEELRA RVAAALPPGV
EAITGRQLAD ESASAVQNAV SGFSTFLLIF AAISVFVGAF IIFNTFTMLV AQRVRELALL
RAIGASKRQV QVSLQVEAAL VGFAGATVGL VSGAGLALLL RVAVGVFGVA LPSGALVFRP
RTVVIAYAVG VLITAAAAFV PARKAASVPP IAAMRETYVL PTRSLRSRAI AGSVLTALGI
VLLILGTASA GKPGATAVGV GAAGIFLGVA TLSPLLSGPI TRVLGAPLAR MFGATGRLGR
ENAMRNPRRT ASTASALMIG LALVSAFSVL GQSIKESVRE TVSNSLGADF YLTPQNFGQG
FSGEVARELA GKPGIEIATG LRGGLVKISG QSSQVLAGDP AGLVKMLAIK EVTGDVHALG
DGTILAEDST AADHQLRVGQ KVPVTFADGR AELTLVGTYQ KSQVAGKWII STSEFARHST
DDLDLFVLVK RASGADPAMV RAEIATVVKS FATVEVRDQS EFVAQQEKQV DQLLGFIYVL
LALAVIIALF GIVNTLALSV IERTREIGLL RAVGMTRSQM RLMVILESVI ISVFGAVLGV
VVGSIFGWAL TKALASLGIS TFAYPVRTIL LVVLTGAILG VLAAVFPARR AARMDVLRAI
SAV
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