Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2627 |
Symbol | |
ID | 3906300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3100245 |
End bp | 3101159 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637879952 |
Product | proteasome subunit beta |
Protein accession | YP_481718 |
Protein GI | 86741318 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.167661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTGCT TCATCTGTAA CGTCGGGCCG GGAGCCTCGG GGACGCCCCG GGCGCGCGGC CCACGTGACC GACTATCGGA AGGGGGATGC GTGGCTGATC CATTGGGGGC CGCCGGGCGC CTACCGGCTG TGTTCATGAC GCCGGGAACA TCGTCGTTCG CCGATTTCCT GTCGCGGTCG GCGCCGCACC TGCTGCCGGG GGCCCGGAGT GGCCTGCCGG GGCCGGTCAC CGAGGTGGCG CACGGCACGA CGATCGTGGC GGTGGCGTTT CCCGGTGGCG TGATCATGGC CGGTGACCGG CGCGCGACAC AGGGGCACAT GATCGCTCAG CGGGACGTCG AGAAGGTCCA TCACGCCGAC GACTACTCCT GTGTGGGGTA TGCCGGCACC GCCGGGGTCG GCGCCGAGCT GATCCGGCTG TTCCAGGTGG AGCTGGAGCA CTACGAGAAG ATCGAGGGGT CGACGCTGAG CCTGGACGCG AAGGCCAACC GGCTGGCGGC CATGGTCAAG GGGAACCTGC CGATGGCCCT GCAGGGCCTC GCCGTCGTCC CGCTGTTCGC CGGGTACGAC CTCGACACGG GCAAAGGGCG GATCTTCTCC TACGACATCG CGGCGGCGAA GTCGGAGGAA CGCACGTACG AGTCGATCGG TTCGGGCTCG GTGTTCGCGA AGGGTTCACT GAAGAAGCGG TTCCGGTCCG ATCTCAGCCA GGACGACGCC GTCCGGATCA GCGTCGAGGC CCTCTACGAC GCCGCCGACG ACGACTCGGC GACCGGCGGG CCGGACGTAA TCCGCAAGCT GTACCCGATC GTCGCGGTCG TGACGGCGGA CGGCTACCGT CGCTATGCCG ACGATGAGAT AGAACCGGTG GTGACGGCCA TCATCGCGGA CCGTTCGACG AACTCGGGAG GCTGA
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Protein sequence | MLCFICNVGP GASGTPRARG PRDRLSEGGC VADPLGAAGR LPAVFMTPGT SSFADFLSRS APHLLPGARS GLPGPVTEVA HGTTIVAVAF PGGVIMAGDR RATQGHMIAQ RDVEKVHHAD DYSCVGYAGT AGVGAELIRL FQVELEHYEK IEGSTLSLDA KANRLAAMVK GNLPMALQGL AVVPLFAGYD LDTGKGRIFS YDIAAAKSEE RTYESIGSGS VFAKGSLKKR FRSDLSQDDA VRISVEALYD AADDDSATGG PDVIRKLYPI VAVVTADGYR RYADDEIEPV VTAIIADRST NSGG
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