Gene Francci3_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2613 
Symbol 
ID3906519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3083931 
End bp3085130 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content76% 
IMG OID637879938 
Producthypothetical protein 
Protein accessionYP_481704 
Protein GI86741304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00181742 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.271812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACCG GGGGACGGCA TCGTGGCGGC GGCGAACATG ATCCTCTTCC GGGACAGCGC 
CCCGAGCCGG GACACTCGGC GCCGTCGCCC CCGCCGGCCT CGGGCGAGAC CGGCCTGCCC
GGCCTGCCCG GCCTGCCCGG CCCGGCCGAT CCGGCCGGAC GGGCGTGGGC CCGGTTCGGC
GGCGTTGACG GGCTCGGCAC GCACGGTGTC CGGCGGATCG CCGTCATCAC CGTCGGCATG
GCCCTGCTGA TGGGCGTCCT GGTCTGGCTG TACGGAACGT CCGTCACCAG TCTGCGTCCC
CGGGACCTGC CGATCCTCAC CGTGGGCCCG GCACCCGCGG CGACCGCGCT CGCCGACCAG
ATCAGCCGGG TGGAGCCGGG CGCCCTCACG GTGCGCACGG TGCCGACGGT GGCCGCCGCC
GACCGTGCGC TGCGCGAGCG TGACGCCTAC GCCGCGATCG TCATCGGCGG CAACGGCCTG
ACCCTGCGGG TCGCCTCCGC GGCGAGTCCG GCGGTCACCG AGGCGCTGAC CCGGGGCATC
CGGGTGTTCA TGCCAGGTCT GGAGATCCCG GTGGTCGACG TGGTGGCCAA CGCGCCACGG
GACCAGGCCG GCGGCGGGCT GGCGGCCGGT TACCTCCCGT TGACGCTGGT GATCACCGCG
GCCGGCGTGC TGCTGGCACG GATGGTGGGG TCGCGGGTGA TCCGGCTCGC CGGGCTCGCC
GCGCTCGCGG TGCTCTCCGG CTTCGCCGGG GCCGTCGCGC TGCAGGGGGC GTTGGACGTC
CTGCCCGGGG AGTTCCTGAC GACGATGGCG GTCGTGACGT TGCTGGCGCT GGCCGTCGCC
GGGCCGGTCC TGGGACTCGG GGCGGTCGCG GGCGTGCCGG GTCTCGTCGC CGCGGTGCTG
GTTCTGGTCG CCGGTGCCGC TCTGTCGGCG GCGGCCTCCG CCCCGGAGAT GCTGCCACGG
CCCTGGGGCG ACATCGGCCA GTTTGCGCCG CCGGGGGCGG GTGCCACGCT GCTGCGCTCG
ACGGCCTACT TCGACGGTGC CGGCGGTGGC CGTCCGGTAC TGGTCCTCGC CGGCTGGTTC
GTCGTCGGGC TGGGCCTGGC GGTTGTCGGT CGACCCGTCC GTCCGCAGGA GGGGCGAATC
CGCATCAGGG TGACATCCGG CCCGAGCGTC CCGGCGCGCC GAGGCGGCAT CCGAGCATAG
 
Protein sequence
MVTGGRHRGG GEHDPLPGQR PEPGHSAPSP PPASGETGLP GLPGLPGPAD PAGRAWARFG 
GVDGLGTHGV RRIAVITVGM ALLMGVLVWL YGTSVTSLRP RDLPILTVGP APAATALADQ
ISRVEPGALT VRTVPTVAAA DRALRERDAY AAIVIGGNGL TLRVASAASP AVTEALTRGI
RVFMPGLEIP VVDVVANAPR DQAGGGLAAG YLPLTLVITA AGVLLARMVG SRVIRLAGLA
ALAVLSGFAG AVALQGALDV LPGEFLTTMA VVTLLALAVA GPVLGLGAVA GVPGLVAAVL
VLVAGAALSA AASAPEMLPR PWGDIGQFAP PGAGATLLRS TAYFDGAGGG RPVLVLAGWF
VVGLGLAVVG RPVRPQEGRI RIRVTSGPSV PARRGGIRA