| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2591 |
|---|
| Symbol | |
|---|
| ID | 3906497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3056696 |
|---|
| End bp | 3058066 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637879916 |
|---|
| Product | Dyp-type peroxidase |
|---|
| Protein accession | YP_481682 |
|---|
| Protein GI | 86741282 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01412] Tat-translocated enzyme
[TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.278958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGACA TTGTGGACGC TGCCGATGTA ACGGATGTCG CCGATGCGAC GGATGCGGTC
CGGGAGAACC GCCCGATCGG TCCCCACCGC CGCAGGGTGC TGCGGGGCGC CGGGCTGCTC
GGCTTCGGCG GTGGTGTCGC GATCGGGGGA GGCCTCGGGG GAGTCATGGC CCTCGACGGC
GGTGTCGCCG TTGCCGCGGA ACGTCCCCAG GAGGACCAGT CGGGCGGGAC GGACCGCGTC
GCCGCGGTCC GTCGTGAGGC GCTGGCCGGG GTGGTGGGCG ACGGCCGTCA CCAGCCCGGA
ATCGCCGACC GCCCTCCCGC GCAGCTCGTC TTCACCGCCT ACGACCTGAC GACGTCCGGC
CCGGCCGCGG TCCGCACATC CCTCGCCGCG GTGCTGCGCA CCTGGACGGC CGCCGCCGCG
GTGCTGATGC GAGGCGAGCC GCTCGACGGC GCTGAGCGGG ACACCCAGGG ACTCGGACCG
GCGGGGCTGA CGATCACCAT CGGGCTCGGC GCGTCCGCGC TGCGCCGCGC CGGTCTCGAC
GCGCAGATAC CCGCGGAGTT CGCGGACATT CCCGCGATGC CCGGTGACCA GCTCGATCTG
GCGCGCAGTG GCGGGGATCT CGGCGTGCAG GTCTGCGCCG AGGATCCGAT GGTCGCGGTC
TCGGCTTCCC GGCAGATGCG TCGTCTCGCC GCTCAGGATG CCAGGCCCCG CTGGATCCAG
CGGGGATTCC TTCGTTCCGC GGCGGCCGCG TTCAACCCCG GGTCCACCCC ACGCAACCTG
ATGGGGCAGA TCGACGGCAC GGACAACCCG GGACCGGGCA CGCCGCGGTT CGACCGGGCG
GTGTGGGTGT CCAGCGGGCC GGAATGGATG CGGGACGGGT CCTACCTGGT CTGCCGGCGT
ATCCGCATGC TGCTCGATGC CTGGGCGCGG CTGGACGAGA CGGCTCAGAG CGCGGTCATC
GGCCGCCGTA AGTCCGACGG TACCGCGCTC TCGGCACCGC CGGTGGGGCA GGGCGGCGCT
GAGACCATCC AGCCGGACTT CACTGCCCGC GCCGCCGACG GCAGTCTCGC GATCGCCGGC
AACGCCCATG TCCGGCTGTC CCACCCGTCG TTCCACGGTG GGATCGCCAT GCTTCGTCGC
GGCTACTCCT ATGACGACGG CCTGGACTCA GCCGGCGAGC CGGACGCCGG CCTGTTCTTC
GCGGCCTACC AGGCCGACCC GCGTACGGCG TTCGTCGCGG TGCAGCGGAC CCTCGCGGCC
GGCGACGCAT TGAACACCTT CATCCGGCAC ACCTCCAGTG CCCTGTTCGC CGTCCCGCCC
GCGGCGCCCG CGGGCGGCTT TCTCGCGCAG GGGCTCTTCG GCGCCGGCTG A
|
|---|
| Protein sequence | MSDIVDAADV TDVADATDAV RENRPIGPHR RRVLRGAGLL GFGGGVAIGG GLGGVMALDG
GVAVAAERPQ EDQSGGTDRV AAVRREALAG VVGDGRHQPG IADRPPAQLV FTAYDLTTSG
PAAVRTSLAA VLRTWTAAAA VLMRGEPLDG AERDTQGLGP AGLTITIGLG ASALRRAGLD
AQIPAEFADI PAMPGDQLDL ARSGGDLGVQ VCAEDPMVAV SASRQMRRLA AQDARPRWIQ
RGFLRSAAAA FNPGSTPRNL MGQIDGTDNP GPGTPRFDRA VWVSSGPEWM RDGSYLVCRR
IRMLLDAWAR LDETAQSAVI GRRKSDGTAL SAPPVGQGGA ETIQPDFTAR AADGSLAIAG
NAHVRLSHPS FHGGIAMLRR GYSYDDGLDS AGEPDAGLFF AAYQADPRTA FVAVQRTLAA
GDALNTFIRH TSSALFAVPP AAPAGGFLAQ GLFGAG
|
|---|
| |