Gene Francci3_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2547 
Symbol 
ID3904038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3009571 
End bp3010002 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID637879874 
ProductNUDIX hydrolase 
Protein accessionYP_481640 
Protein GI86741240 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTC GCCATCAGGT TACTACTGAT GTTCATCTAA TCTTGCTCCG AAACAACGAA 
GCCCTGTTCG GCCGTCGCCA GAACACCGGC TACGAGGACG GTGCGTACCA CCTGCCCTCC
GGCCACCTGG AGGCGGGAGA GTCCGTGGTC ACGGCCCTCA TTCGGGAGGC CAAAGAGGAA
ATCGGGGTGA CGATCCAGCC GGAGGCGGTG GAGTTCGCGC ACATCATGCA CAACTCTTCC
GGCGGCGGCC GGGCCGCCTT CTTCTTCATC GTCCGGGAGT GGGACGGCGA ACCGGTGAAC
CGGGAGCCGG AGAAGTGCAG CGAACTGGCC TGGTTCCCAC TGGATGCCCT GCCGGACCAC
ATGATCGCCT ACTGCCGGGC GGCGCTGGAA GACATCGCCG CGGGCCGGTC CTTCTCCGTC
TTCGGCTGGT AG
 
Protein sequence
MPARHQVTTD VHLILLRNNE ALFGRRQNTG YEDGAYHLPS GHLEAGESVV TALIREAKEE 
IGVTIQPEAV EFAHIMHNSS GGGRAAFFFI VREWDGEPVN REPEKCSELA WFPLDALPDH
MIAYCRAALE DIAAGRSFSV FGW