Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2546 |
Symbol | |
ID | 3904037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3008603 |
End bp | 3009436 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637879873 |
Product | transposase |
Protein accession | YP_481639 |
Protein GI | 86741239 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTCA CATACACCGC CGAGCTGCCG TTCGGCGATC ACACCGTTTT CCGTCTGGCG GGTCTTCTCG TGGCGGAGCG TCAACGTCGT GGTACCCGCA AGGGCACCCG GACGCTGTCC GCGTTGGAAC AGGCCGTGAT GGTCCTGCGC TGGTTCTGTG ACGGCACCAG GGCCAGGCGG CTCTTCTCCG ATCATGGGGT GTCCCGGTCG GTGGGCTACC GCTACCTGCA CGAGGGAGTC GCCGTGCTCG CCTGGCAGGC CCCGGACCTG CGTGAAGCGC TGATGCGGGC CAGGGTCGCC GGCTACGAGC ATCTCATCGT TGACGGCACG GTCATCGAGA CCGACCGGCT ACGCATGCCC GGCCCGACCG AAGGCGTGGA CCTGTGGTGG TCCGGCACGA TCTCCAACCA CGGTGGCAAC ATCCAGGTGC TCTCCGCCCC GGACGACGGC TGGCCACTGT GGGTCTCCGA CGTGCGGCCC GGCCGCGAGC ACGACTCGAC CGCCCTGAAA GCCTCCGGGG CGCTGCCGGT TCTCGCCGAG TGGACCGCCG ACCTGCACGA GGTGCTGTTC GACCTCGGCT ACGAAGGGCT GGGCAACCCG GCCGGGCCGC TCGCGACCGC GTACAAGAAG CCCAAGGGCG GCACCCTCAC CGACGAACAG AAAGCGCACA ACCGGATCCA CAACGCGCTA CGCGCCGTCG GTGAACGCGC GAACGCCCTG CTCAAAGGCA CCTTCCGACT CCTCCACAAC ATCACGATCG ACCCCTGGAA GATCGGACTT GTCGTGAAAG CCGCCCTCGT CATCCTCCAC ACCGAGCACC GCAGAACCGC CTGA
|
Protein sequence | MSFTYTAELP FGDHTVFRLA GLLVAERQRR GTRKGTRTLS ALEQAVMVLR WFCDGTRARR LFSDHGVSRS VGYRYLHEGV AVLAWQAPDL REALMRARVA GYEHLIVDGT VIETDRLRMP GPTEGVDLWW SGTISNHGGN IQVLSAPDDG WPLWVSDVRP GREHDSTALK ASGALPVLAE WTADLHEVLF DLGYEGLGNP AGPLATAYKK PKGGTLTDEQ KAHNRIHNAL RAVGERANAL LKGTFRLLHN ITIDPWKIGL VVKAALVILH TEHRRTA
|
| |