Gene Francci3_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2518 
Symbol 
ID3904662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2974379 
End bp2975482 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID637879848 
Productmethane/phenol/toluene hydroxylase 
Protein accessionYP_481614 
Protein GI86741214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.692881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAG TCACGGGTAA GACCAGGAGC TTCCCCAAGC CGGAGTTCAC CGACGCGGAG 
GCGGGCGCGT TAACGTTCCC CAGCTCCACC AGCCGTGTGT ACAACTACTT CAAGCCGCAG
AAAATGCGGG CGACCATGTA CGAGGACGTC ACCTTCGACG TCCAGCCGGA CCCTGACCGC
TACCTGGCCC AGGGCTGGAT CTACGGTTTC GCCAAGGGGC CCGGCGGATA TCCGCAGGAC
TGGACGGCTC TGCGCTCCTC GGACTGGCAT GCCTTCCGCG ACCCCAATGA GGAGTGGGAG
CAGACCATCT ACCGGAACAA CTCCAATGTT GTCCGGCAGA TCCAGCAGAA CCTTGAAAAC
GCGCGGGCGG CCCATGCCTA CGACGGCTGG TCGCGGGGGT GGACCAAGTT CGTCGAGCAG
CACCTGGGCG CCTGGATGCA CGCTGAGAAC GGTCTGGGCC TGCACGTGTT CGTCGCCGCC
CAGCGGTCGG GTCCCACGAA CATGATTAAC ACTGCCATCG CGGTGAACAG CGCGCACAAG
CTCCGCTTCG CCCAGGACCT CGCCCTGTAC AACCTGGAGT TGGCCGAGTC CCTGCCGGGG
TTCGACGGAT CGGCCCACCG CAAGGTCTGG CACGACGACC CGGTGTGGCA GCCGGTGCGG
GAGAACGTCG AGCGGATCAC CGCGGTCGCT GACTGGGCGG AGGCACTCGT CGCCGCGAAC
ATCGTGTTCG AGTCGCTGGT CGGCGTGTTA TTCCGCAGCC ACCTCGTCAT GCAGATCGCC
GCCCGTAACG GCGACTACGT CACGCCGACC CTGGTCGGAA CCGGCGAGAA CGACTACGAG
CGCGACCTGC GTTACACCCG CGCGCTGCTC AAGCTTCTCA TCACCGACGA GAAGTTCGGC
GCAGGCAACG TCGAGACCCT TTCCGGCTGG TTGTCCCGGT GGGTTCCGCT GAGCTTGAAG
GCGGCCCATG AACTGCAGCC GATCTGGTCG CAGCCGCAGG AGAAAGTCAT CACCTTCTCG
GAATCCCTCG ACGCTACGGT CAACGGATTC CGGGCCGTCC TTTCCGACCT TGGTCTGCCC
GAGCCGAAGG AGCTGACGCA GTGA
 
Protein sequence
MTQVTGKTRS FPKPEFTDAE AGALTFPSST SRVYNYFKPQ KMRATMYEDV TFDVQPDPDR 
YLAQGWIYGF AKGPGGYPQD WTALRSSDWH AFRDPNEEWE QTIYRNNSNV VRQIQQNLEN
ARAAHAYDGW SRGWTKFVEQ HLGAWMHAEN GLGLHVFVAA QRSGPTNMIN TAIAVNSAHK
LRFAQDLALY NLELAESLPG FDGSAHRKVW HDDPVWQPVR ENVERITAVA DWAEALVAAN
IVFESLVGVL FRSHLVMQIA ARNGDYVTPT LVGTGENDYE RDLRYTRALL KLLITDEKFG
AGNVETLSGW LSRWVPLSLK AAHELQPIWS QPQEKVITFS ESLDATVNGF RAVLSDLGLP
EPKELTQ