Gene Francci3_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2515 
Symbol 
ID3904659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2972179 
End bp2972895 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID637879845 
Producthypothetical protein 
Protein accessionYP_481611 
Protein GI86741211 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.467956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC CCACAGTAAC CAGTAGGACC GGCCTGGCCG CGGACGTCTG GGAAGCTTTG 
GGGCGGGTGT ACGACCCAGA GCTCGACCAG CCCGTCACCG AGCTGGGATT CGTCCGTGCT
CTGGTGGTCC AGGACGGGCG GGTGCAGGTT CGGCTCAGAC TCCCGACCTA CTTCTGTGCG
CCGAACTTCG CCTACCTGAT GGTGTCCGAC GCGCACGACG TGGTGAAGGA GCTGCCAGGA
GTCACCGAGG TGGACGTGGC CCTGGAGGAT CACTTCGCTG CCGAAGAGAT CAACGCCGGA
GTCGCCGCCG GAGACGGTTT CCCGGCGAGT TTTCCTGGGG AGGCCACCGG AGGCCTCGAC
GACCTGCGGA TGACCTTCCT GCGTAAGGCG CACACCGCCA GCCTGGAAGG CGCGGCCAAG
CGCCTGGTAG CCGCGGGCTG GTCACCCGAG TCGCTGGATC GGGCCCGGCT GGCGGACATG
CCGGAGTCAC CGGAACGACG CAGCCTGCTG CGCCGACGGG ATGCCCTCGG ACTGTCCCTG
GCTCCCGAGG CGCCGCTGTT CGTTGACGAC GACGGCCGTC CGATCGATCG CGAGGCGCTG
CCCCTCCGGC TGCGGTTTGC CCGGACCGTC CGGGTGACGA TCGACGCGAA CACCACGGTC
TGCCGCGGTC TGCTGGAGAC GCGGTACGGC ACGGTGGACC GCACACCCAT GACGTGA
 
Protein sequence
MTTPTVTSRT GLAADVWEAL GRVYDPELDQ PVTELGFVRA LVVQDGRVQV RLRLPTYFCA 
PNFAYLMVSD AHDVVKELPG VTEVDVALED HFAAEEINAG VAAGDGFPAS FPGEATGGLD
DLRMTFLRKA HTASLEGAAK RLVAAGWSPE SLDRARLADM PESPERRSLL RRRDALGLSL
APEAPLFVDD DGRPIDREAL PLRLRFARTV RVTIDANTTV CRGLLETRYG TVDRTPMT