Gene Francci3_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2514 
Symbol 
ID3904658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2971117 
End bp2972142 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content68% 
IMG OID637879844 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_481610 
Protein GI86741210 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.396578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCCG TCCAGGTCAT CAAGTACGAC AACGCGCCGC GGCTGGTAGA CGTCCCCGAG 
CCCAAGATCC TCCATCCGCT GGACGTGGTG GTCAGGATCG GCGGCGCCGG TGTCTGTCGG
ACCGACCTGC ACATCATCGA AGGGCAGTGG GAGCAGAAGT CGGGCGTGAC CCTGCCGTAC
GTGCTCGGCC ACGAGAACGC CGGCTGGGTG CACGAGGTCG GTTCGGCGGT GAGCGACATC
GCCGTGGGCG ACCCGGTCAT CCTGCACCCG CTGGTCACCT GCGGGCTATG CCGGGCCTGT
CGGGACGGCG ACGACGTGCA CTGCGCCCGG GCGTCCTTTC CCGGAATCGA CAGCGACGGC
GGCTACGCCG AACTGCTGCG GACCAACGCC CGGTCGGTGG TCAAACTCGA CCCGTCGTTG
CAACCGGCGG ATGTGGCGGC ACTGGCCGAC GCCGGACTGA CCGCCTATCA CGCGGCACGC
AAGGCAGCCG CGGCGCTGAG TCCCGGTGAC CGGGTCGTGG TGATCGGAGC CGGCGGTCTG
GGCCACATCG GTGTGCAGGT GCTGCGTGCC CTCACCCCAG CCGAGATCAT CGTCGTCGAC
CGCTCCGCCG AGGCGTTGCG GCTCGCCGGC GAACTGGGCG CCGACCACAC GGTGCGGGCC
GACGGCAGCG AGGTGTCCGC GGTACTCGAT CTCACCGGGG GCAGCGGCGC CGAGGCAGTC
ATCGACTTTG TCGGCGAAGG CGGTGCGATC GAGGCGGGTG TCGCCATGCT GCGTCGCGCC
GGTTCGTATT ATGTTGTCGG CTATGGCGGG GTGCTGAACG TCTCCACCAT CGACATCATT
TCCACTGAGA TCAACTTCAT CGGTAACCTG GTCGGATCGT ACAGCGACCT CGTTGAGCTG
ATGGTTCTCG CAACCCGTGG CAAGGTCACC CTGCACACGA GTGCCTACCC CCTGGCAGAG
TTCCACCAGG CGCTCGACGA CCTTCACCAC GGCAAGGTGC GCGGTCGGGC GATCCTGATC
CCCTGA
 
Protein sequence
MRAVQVIKYD NAPRLVDVPE PKILHPLDVV VRIGGAGVCR TDLHIIEGQW EQKSGVTLPY 
VLGHENAGWV HEVGSAVSDI AVGDPVILHP LVTCGLCRAC RDGDDVHCAR ASFPGIDSDG
GYAELLRTNA RSVVKLDPSL QPADVAALAD AGLTAYHAAR KAAAALSPGD RVVVIGAGGL
GHIGVQVLRA LTPAEIIVVD RSAEALRLAG ELGADHTVRA DGSEVSAVLD LTGGSGAEAV
IDFVGEGGAI EAGVAMLRRA GSYYVVGYGG VLNVSTIDII STEINFIGNL VGSYSDLVEL
MVLATRGKVT LHTSAYPLAE FHQALDDLHH GKVRGRAILI P