| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2462 |
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| Symbol | |
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| ID | 3905074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2902016 |
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| End bp | 2903932 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637879792 |
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| Product | ABC transporter related |
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| Protein accession | YP_481558 |
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| Protein GI | 86741158 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.075214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.19006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCG GAGCTCCGGG CCCCATGATG ATCCGCGGGG TGGGTGGTGA CCGACCGATT
ACCCGGCAGC AGATCAGGCC GGGTACAATG CGCCGGATCC TGCCTTATGC CAAGCCTTAT
CGGTGGCGCC TGGTGCTGCT GCTGGCAGCC GGGTCACTCG AGGCCGCGAG TATTGCGGCC
AATCCACTGC TACTCAAGTT CCTCATCGAC GACGGCATTT TGAAGGAGAA CACCAGGCTG
GTCGTCGTAG TCGCCTCGGT CGTCGCGGCA CTCGCCCTTC TGGATGCCTT TCTGGGAATC
GCTCAGCGGA TGCTCTCCGC GCGATTTGGC GAGCAGATAA TCTATGATCT GCGGACCCGG
GTCTTCGCCC ACGTGCAGCG GCAGCCGATC GCCTTCTTCA CTCGGGCGCA GACCGGCTCG
CTGGTCAGCC GGCTGAACAC CGACGTGATC GAGGCGCAGC AGGCGATGTC GCAGTTGCTG
ACTGTGTTGG TGTCCAGCGC GCTGTCGCTG GTCCTGGTGA TAGTCACGAT GTTCTACCTG
TCATGGGTCG TGACGATAGT CGTGCTCGCG CTCGTCCCGT GCTTCATGCT GCCGGCCCGG
GTCGTCGGCC GCAGGCTGCA GCGGTATGCC CGGGAGGGCA TGCAGCTCAA TGCCGAGATG
AGCACGATGA TGAACGAGCG CTTCAACGTG GCGGGCGCGA TCCTCGTCAA GCTTTACGGC
GAGCCCGAGA CCGAGAGCAG GCAGTTCGAG GACCGGGCGG CGCGGGTCCG CGATATCAAC
GTGCGGACCG CCGTCTATGG GCGGGTGTTT TTCGTCGCGA TGACGATGGT GGCCTCGCTC
GCCACCGCGG CGGTCTATGG CATCGGCGGT GTTCTGGTCA TCCACGACGA CTTCCAGCTC
GGCACCCTTG CCGCCTTCGC GGTCCTGCTC AACCGGCTGT ACGGCCCGAT CAACCAGCTC
TCCAACATCC AGCTCAACGT GCTGACCGCG CTGGTGAGCT TCGACCGGGT CTTCGAGGTG
CTCGACCTGC GGCCGCTCGT CGCCGAACGC CCCGGCGCGA TCGCGCTGCC GTCCGCCTCG
TCGGCCGCGC CGGAGATCGA GTTCGACGAG GTGTCGTTCC GCTACCCAAC CGCCGACGAG
GTGTCACTCG CCTCGCTCGA ATCGATCGCG CTGCCGTCCG CCGAGCGCAC CGGGAGCACC
GCGATGGTGC TGGATCGGAT CAGCTTCCGG GCTCCGGCGG GAAAGCTCAC CGCGCTGGTC
GGCCACTCGG GCGCCGGGAA GAGCACGATC ACCCATCTGG TCTCCCGGTT GTATGACCCG
ATCGCTGGGA CAGTCTGGAT CGATGGTCAC GACCTGCGGG ACCTCACGCT GAAATCACTG
CGTGACACGG TCGGGGTGGT GACCCAGGAC GCGCACATGT TCCACGACAC CATCGGGCGG
AACCTGGCGT ATGCCAAGCC TGACGCGACC GACGAGGAGA TCGTGCGGGC GTGCCAGGGC
GCGCAGATCT GGAATCTGAT CTCCGCGCTG CCGCACGGCC TGGACACCGT CGTCGGGGAT
CGCGGCTACC GGCTGTCCGG CGGTGAGAAG CAGCGGCTGG CGCTGGCCCG GCTGCTGCTG
AAGGCGCCGT CGATCGTGGT GCTCGACGAG GCCACCGCTC ACCTGGACTC CGAGTCCGAA
GCCGCCGTCC AACGGGCCCT GAAGAGCGCG CTGGCAGGCC GTACCTCTCT GGTGATCGCG
CACCGGCTGT CGACCATCCG GGAGGCCGAC CAGATCCTGG TGATCGACGC GGGCGGTGTC
CGCGAGCAGG GCTCGCACGA AGATCTGCTG GCGGCGGGCG GGCTCTATGC GGAGTTGTAC
TTCACCCAGT TCGCCGGGCA GGCGACGGAC TCGGTCGACG ACAGGGTCGG CGCCTGA
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| Protein sequence | MTLGAPGPMM IRGVGGDRPI TRQQIRPGTM RRILPYAKPY RWRLVLLLAA GSLEAASIAA
NPLLLKFLID DGILKENTRL VVVVASVVAA LALLDAFLGI AQRMLSARFG EQIIYDLRTR
VFAHVQRQPI AFFTRAQTGS LVSRLNTDVI EAQQAMSQLL TVLVSSALSL VLVIVTMFYL
SWVVTIVVLA LVPCFMLPAR VVGRRLQRYA REGMQLNAEM STMMNERFNV AGAILVKLYG
EPETESRQFE DRAARVRDIN VRTAVYGRVF FVAMTMVASL ATAAVYGIGG VLVIHDDFQL
GTLAAFAVLL NRLYGPINQL SNIQLNVLTA LVSFDRVFEV LDLRPLVAER PGAIALPSAS
SAAPEIEFDE VSFRYPTADE VSLASLESIA LPSAERTGST AMVLDRISFR APAGKLTALV
GHSGAGKSTI THLVSRLYDP IAGTVWIDGH DLRDLTLKSL RDTVGVVTQD AHMFHDTIGR
NLAYAKPDAT DEEIVRACQG AQIWNLISAL PHGLDTVVGD RGYRLSGGEK QRLALARLLL
KAPSIVVLDE ATAHLDSESE AAVQRALKSA LAGRTSLVIA HRLSTIREAD QILVIDAGGV
REQGSHEDLL AAGGLYAELY FTQFAGQATD SVDDRVGA
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