| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2453 |
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| Symbol | |
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| ID | 3905065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2860867 |
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| End bp | 2861745 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637879783 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_481549 |
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| Protein GI | 86741149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.513955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGCTG ATCTCGTGCC CCGGCGCCTC ATCGTCATCG GCGCCGGATT AATCGGCACC
TCGATCGCCC TGGCCGTACG CGACCACGGC GCCGACGTGC TGCTGACCGA CCGCGATCCG
GCGGCGGCGC GGCTCGCCGC GGGCCTCGGC GCCGGGGTGG TGCTACCCGG TGGACCCGCC
GCCTACCGGG GCGCTCCCGC CGACCTCGCG GTGCTGGCCG TACCGCCCGC CGCCGTGCCT
GCCGCCCTGC GGGACGCGCA GAAGCACCAG GTGGCCCACG TGTACACCGA CGTGGCCAGC
GTCAAGCAGG CGCCGATCGC CGAGGCTGCC AAGCTGGGCT GCGACCTCAC GGCCTTCGTC
GGAGGCCACC CCCTGGGCGG CAGGGAATGG TCAGGGCCGC TGGCCGCCCG GGCCGGCCTG
TTCCGCGGCC GGTCCTGGGT ACTGTGCCCC ACCGGCGAGT CCGGCGCGGC CGCCGCCGCC
ACGGTGACCG CGCTGGTGCG GGCCTGCGGC GCGCGGCCGG TCCTGATGGA TCCCGCCGAG
CACGACCGGG CGATGGCGGT GATCTCGCAC GCCCCGCACG TGGTGGCCTC GGCGATGGCG
GCCCGCTTCG TGGACACCCC GGAGACAATC ATGAGGCTGA CCGGGCAGGG TGCGCGCGAC
GTCACCCGGA TCGCGGCGGG CGACCCTCGG CTGTGGCTCG GCATCATGTC GGCCAACGCC
CATCCGATCG CCGACGTGCT CGACGAGGTG GCGCGGGATC TGGCACGTAC GGCCTCGGCG
CTGCGGTCCG AGGGGAACAC CGCCGTCACC GATCTGCTGG TCCGCGGCCG GGTCGGGCAC
GGTCGCATCC CCGATCCACA GAAAGTGGAG GACAGCTGA
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| Protein sequence | MGADLVPRRL IVIGAGLIGT SIALAVRDHG ADVLLTDRDP AAARLAAGLG AGVVLPGGPA
AYRGAPADLA VLAVPPAAVP AALRDAQKHQ VAHVYTDVAS VKQAPIAEAA KLGCDLTAFV
GGHPLGGREW SGPLAARAGL FRGRSWVLCP TGESGAAAAA TVTALVRACG ARPVLMDPAE
HDRAMAVISH APHVVASAMA ARFVDTPETI MRLTGQGARD VTRIAAGDPR LWLGIMSANA
HPIADVLDEV ARDLARTASA LRSEGNTAVT DLLVRGRVGH GRIPDPQKVE DS
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