| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2446 |
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| Symbol | |
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| ID | 3905058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2841572 |
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| End bp | 2843011 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879776 |
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| Product | hypothetical protein |
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| Protein accession | YP_481542 |
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| Protein GI | 86741142 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0214415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC TCGGCACCCA CAGGCCGGCC CACGCACCGG CGACATCCTC GAGCAGGTTC
TTCGTGACCT ACCTGCTGCG CGGCCTGCGG GGACGGGCCC GGCAGACAGT GATCGTCGCG
GTCGGTCTGG CGGTGGGGGT CGCTGCGGTG GTCACGCTGA CCGCGGCGTC GACGGGCGTG
AGCCGGGCGC AGACCACGGT GCTCCACTCG CTATACGGGG TGGGCACCGA CATCTCGGTG
ACGACGGCGG CCACCAGCGG CTCGGGTTCG AGCGGTTCGG GTTCGAATCA GGGCCTGGTC
ACGTCCGGAG ACGCGGGCAA GGAGTTCTTC CGGCTGCCGC CCGGCCTCGG GCTGCTGGAT
TCCTCAGCCC TGGCCCCGAT CTCGAAGATG TCCGGCGTGG CCGAGGTCGC GGGCGGCCTG
AGCGTGGGTG AGACGGTCGT CGGCCCGACG CCGTCCACCG GCGGGCTACC CAGCCTCACC
TCGACCAGCA TCGACGGGGT CGATGTCGCG CACCTCAAGC TCGGCCCGTA CGCCTCCGGC
ACGCTCACCT CGGGCCGGTC CTTCACCACC GCGGACGCCG ACGCCGACCG CGCCGTGATC
GACGCGCGTT ACGCGGCCGC GCACAACCTT GGGGTGGGCT CGACGATCGT GATCGCCAAG
ACCCGCTTCA CCGTGATCGG CATCATCAGC CAACCAGCCG CCAGCGACCC GGAGGACGTC
TTCATCCCGC TCGGCCGCGC CCGGGCACTC GCCTCCTCCG CCCGGCCCGA CCTGGCCGGG
AAGCTTACCG CGATCTACGT GGCCGCCGCC GGCGCGGCCG ACATCCCCAC CGTGCACGAC
GAGGTCGCCA AGCTGCTCCC GAGTGCCACC GTCACCAGCT CGTCGGACCT GGCCAGCAGG
GTCAGCGGGT CGCTGGCCAG CGCCGCCGAC CTCGCGCGCG ACCTCGGCCG CTGGCTGGCC
GTGGCGATGC TCCTCGCCGC ATTCGCGCTG GCCGCCCTGC TGACCACCGC CGCGGTGCGG
CGGCGGGTTC GCGAGTTCGG CACGCTCAAG GCACTCGGGT GGCATACCCG GCGCATCATC
GCCCAGATCA TGGCCGAATC GCTCGTGACC GGCCTGGCCG GAGCCGCGGT CGGAATCGGG
CTCGGGTTCG CCGGCGCCGC CGTCATCGAC GCGATCGCCC CCACGCTGAC CGCGGCCGTC
GCCCTGAACC CCGGCTCGAC ACCACCCCAG GGCGCGCTGA TCAAGAACGG CAGCCTCGAG
ACGATGACGC TGCCCGGCGG GGTGCACACC CTCAGCGTCC ACCTGCACGC CACCGTCGGG
GCCGCGACGA TCCTGCTCGC GGTCGTGCTC GCGATCGTCG GCGCGGTCCT CGCCGGCGCG
CTCGGCAGCT GGCGCGTCGC CCGGCTGCGC CCGGCCCACG CCCTCGTCCG CGTCGCCTGA
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| Protein sequence | MTALGTHRPA HAPATSSSRF FVTYLLRGLR GRARQTVIVA VGLAVGVAAV VTLTAASTGV
SRAQTTVLHS LYGVGTDISV TTAATSGSGS SGSGSNQGLV TSGDAGKEFF RLPPGLGLLD
SSALAPISKM SGVAEVAGGL SVGETVVGPT PSTGGLPSLT STSIDGVDVA HLKLGPYASG
TLTSGRSFTT ADADADRAVI DARYAAAHNL GVGSTIVIAK TRFTVIGIIS QPAASDPEDV
FIPLGRARAL ASSARPDLAG KLTAIYVAAA GAADIPTVHD EVAKLLPSAT VTSSSDLASR
VSGSLASAAD LARDLGRWLA VAMLLAAFAL AALLTTAAVR RRVREFGTLK ALGWHTRRII
AQIMAESLVT GLAGAAVGIG LGFAGAAVID AIAPTLTAAV ALNPGSTPPQ GALIKNGSLE
TMTLPGGVHT LSVHLHATVG AATILLAVVL AIVGAVLAGA LGSWRVARLR PAHALVRVA
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