Gene Francci3_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2435 
Symbol 
ID3905047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2829310 
End bp2830152 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID637879765 
Producthypothetical protein 
Protein accessionYP_481531 
Protein GI86741131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0576023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.171566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTT TTCGCACCCC CGAACCGATC CTCGCCGTCA TCGAACTCGG GACCGGCCAC 
GTCCGGATCA ACGCGAGCGA CCGCGCCGAC ACGGTCGTGG AGGTACGCCC GAGCGACCCG
TCGCACGACA CCGACGTGCG GACGGCGCGG GAGACCCGCA TCGAATATGA CAAAGGCAAG
CTTCACCTCA GAGCGCCCAG GAAGACGGCC CGCTCGCTGT TCGGGTCGGA CGGCTCCGTC
ACCGTGACAG TCGAGCTGCC CACCGGTTCG CGGGTCGAGG CGAGCTCGAT GACCAACATC
CAGAGCACGG GCCGCCTGGG CGATTCCAGC TTCCACACCG CCACCGGCGA CATTGACCTT
GACCAGACCG GCAGGCTCCG GCTGGGGACC GCCGACGGGA ACGTGTCCGT GGGCCGCACG
ACCGGGCACG CCGAGATCAA GACCTCGAAC GGCATGATCC GGATCCGCGA GATCGACGGC
TCGGCGGTAG TCAAGACGGC CAACGGGGGC GTCACCATCG GTGAGGTGAC GGGAGACGCA
CGGCTGATCA CTGCCTCCGG TGCCATCACC GTCGACCGCG CGCTGGCGGG CGTCGAGGCC
AGGACCGCCT CGGGCAGCGT GCGGATCGGC GAAGTGGTGC GCGGCACAGT CGCGCTCGTA
TCCGGTTCCG GCCGGCTCGA AGTGGGAGTA CGGAAAGGTA CCGCCGCCCT GCTGGACGTC
CGCTCGGGAC GCGGCGGTGT GCACAGCGAA CTGACCGCCA TCCACGCCCC CGCGCCCACC
GACGAGACCG TCGAGGTGCG CGCCCGTAGC GGCGACGGCG ACATCCTGAT CCACCGTGCC
TGA
 
Protein sequence
MPTFRTPEPI LAVIELGTGH VRINASDRAD TVVEVRPSDP SHDTDVRTAR ETRIEYDKGK 
LHLRAPRKTA RSLFGSDGSV TVTVELPTGS RVEASSMTNI QSTGRLGDSS FHTATGDIDL
DQTGRLRLGT ADGNVSVGRT TGHAEIKTSN GMIRIREIDG SAVVKTANGG VTIGEVTGDA
RLITASGAIT VDRALAGVEA RTASGSVRIG EVVRGTVALV SGSGRLEVGV RKGTAALLDV
RSGRGGVHSE LTAIHAPAPT DETVEVRARS GDGDILIHRA