| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2418 |
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| Symbol | |
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| ID | 3906401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2808228 |
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| End bp | 2809418 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879748 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_481514 |
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| Protein GI | 86741114 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.274162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.302095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCC CGACTACCCC GACTACCCCG CACCGGCACC GAACGACGCG AAGGCTGGCC
GCAGCGGCCG TCTCCGTCCT CACGACCGTC ACGCTCGCGG CCTGCGGGAA CGGCGGCGGC
AGCACGGCGT CGGGCGGGAC CCCCGTCCCC GGCGGGCGGC TGAAGATCGC CCTCTGGTCG
GACCTCCAGA ACTGCGTCGA CCCCAACCAG GTGTACTGGA TAGAGACGCG CAGCCTCGAC
CGGAACATCG CCGACTCACT GACCGATCAG GATCCCAGCA CCGGGAAGAT CGTTCCCTGG
CTGGCCAACA GCTGGACGGT GAGCCCCGAC GCCAGCGAGT ACACGTTCTC GCTGCGTAAA
GGTGTGACCT TCAGCGACGG CACCACGCTC GACGCGGCTG CGGTGAAGAC GGCCTTTGAC
GGGTTGCACG CGCTCGGCGC CAAGTCGACG CTGGGCCTGA GCTACCTGGC GAACTACAAG
GCGACGACGG TCGTCGACCC CACCACGGTG AAGGTCGCCT TCAAGGGCGC CGCCCACCTC
GACGGCATCG ACGTCACCTA CATCGCCGAG GACAGCGTCC GCGTCGGCCT TGACGATCCC
GTGCCCGGGC AGTACTTTCG CCCCCTCTGG GACGCGCTGC ACCTCGACTT CGGCCTCTCG
CTCACCCAGA ACACGACCGT CGGCGCGCTG CTCGCCGACA AGCTGCCCAC GACCCTCGCC
CTCGCGGCGG TCGCCGTCGT GCTCATGGCG GTGCTCGGCG TCACGGTCGC CTACCTCGCC
AGCTACCTCC AGTGGGGGCC GGCGCGGGCG CTGCTGCCCC GGCTGCCCGC CGTCGCCATC
TCGCTGCCGC CCTTCTTCGT GGGGCTGCTG CTCATCCAGA TCTTCGCCTT CTCCCTCGGC
TGGTTCCCGG CCACGGGCAC GGACGGGTGG CGCAGCCTGG TGCTGCCCGC GCTGACCCTG
TTCGGCGTCC TCGTCGGCCA CATGGTGGCG AACGCCGTGG TCGTCGAGAC CGTCTTCTCC
CGCAGCGGCA TCGGGCTCCT GGCCCAGCAG TCGGTCCTCA GCCAGGACGT GCCTGTCGTG
CAGGCGATCG TCCTGATCGC CGCGGCCCTG TTCGTCACCG TCAACCTGCT CGTCGACCTG
CTCTACTCGC TTCTCGACCC ACGCGTCGCG TGGACGCCCC GGGTCAACTA G
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| Protein sequence | MTTPTTPTTP HRHRTTRRLA AAAVSVLTTV TLAACGNGGG STASGGTPVP GGRLKIALWS
DLQNCVDPNQ VYWIETRSLD RNIADSLTDQ DPSTGKIVPW LANSWTVSPD ASEYTFSLRK
GVTFSDGTTL DAAAVKTAFD GLHALGAKST LGLSYLANYK ATTVVDPTTV KVAFKGAAHL
DGIDVTYIAE DSVRVGLDDP VPGQYFRPLW DALHLDFGLS LTQNTTVGAL LADKLPTTLA
LAAVAVVLMA VLGVTVAYLA SYLQWGPARA LLPRLPAVAI SLPPFFVGLL LIQIFAFSLG
WFPATGTDGW RSLVLPALTL FGVLVGHMVA NAVVVETVFS RSGIGLLAQQ SVLSQDVPVV
QAIVLIAAAL FVTVNLLVDL LYSLLDPRVA WTPRVN
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