Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2388 |
Symbol | |
ID | 3904595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2763732 |
End bp | 2765009 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637879718 |
Product | hypothetical protein |
Protein accession | YP_481484 |
Protein GI | 86741084 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0574491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0197415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGACCT ATCTGCTCGG CCTTGGTTCC GCGGTGTGTT TCGCGGTGGC CGCGGTGATC CAGCAGCGGG TTGCCTTCCG GGCGCCGCCC GATGACGTCC TGCGGCTGCG GCTGCTGCTG TGGTTGGTGC GGCGACCGTG GTGGGATGTC GGGGTCGCCG TCGCGGTGAT CGGCAGTGTG CTGGCCGCGG CGGCGCTGAG CCGGGGCGCG GTGGCCCTCG TCGAATCCCT GCAGATCTGC CAGCTACTGT TCGCCCTGCC GCTCGCCGCC CTGCTGGCGC AGCGGGCGGT GCCGCGCCGC GACTGGGCGG CGGCCGCGGC GACGGCCAGT GGCCTCGTGC TCTTCCTGAT CGCCGGAGAT CCGCATCCGG GCGATCCGGG GGCCGTCTCG ACGTTCGGCT GGGTCCTCGC CGGCGCGGTG GTCGGCGGGC TGGTGTGCGG TGCGGTGTGG GGGACGCGGC GGCTCGCCGC CGCCCGGCGG GCCCCGATGC TGGCCACGGC CGTGGGCCTG CTGTCCGCGA CGCAGGCCGC CCTGACCAGC AGCATCGGTC ACCTGCTGAC CACCCGCGGG ATCGATGCGG TCCTGGTGTC CTGGCAGCCC TGGTCGGTCG TGGCCACGGC GATCGTCGGT GCGTTGCTGC TGCAGAGCGC CTACGAGATG GCCCCGCTGC CGGCGTCGCT GCCCGCCGCG GTGAGCAGCG AGCCGCTGGC CGGGGTGGTG ATCGGGGTGG CCCTGCTGGG CGGCGACCTG CGGCTGGCGC CCCTCGCGTT GGTCGGTGAG GTGCTCGGCC TGGCCGTGAT GGTCACGGGT GTCCGTACGC TGGCGACGTC TCCGCTGATC ACCGGGCAGA TGTCGCGGCT GGTGGCGAGG CAGGCCCAGG GGCGGCTGTC CCGGCTGGAG GAACAGGTGC ACCATGACCT GGAACGGCTG CGCGCCGACC TGCGCCGCAG CCGGCGGGCC GGCGTCCCGG GGCCGGCGTT GCGACGCGCG CGTCGCCGGC TGCGCCGGGA CCTCGACCGC ATCGGCGCGG AGCTGGCGAG CCTCGTGGAC GAACGGCACC GGTTCGACGA TCGGATGCGG CCGGTCGCCG GGCAGGTGGG CTCGAACGGG TCCCGATCGG GGGAGCGGGG CCTGCTGGGG GACGACGCCG TGCCGGAAAG GGAACTGCTC GCCGCGCGAC GTGCTCTCGA CACCCGGGCG GACGAGCTTC GCCGGCGGGC GGATCGACTG CGCGGTGAGG CCGGTGCCGT CCTGGCTCAG AGGAATCATG CGCGATAG
|
Protein sequence | MATYLLGLGS AVCFAVAAVI QQRVAFRAPP DDVLRLRLLL WLVRRPWWDV GVAVAVIGSV LAAAALSRGA VALVESLQIC QLLFALPLAA LLAQRAVPRR DWAAAAATAS GLVLFLIAGD PHPGDPGAVS TFGWVLAGAV VGGLVCGAVW GTRRLAAARR APMLATAVGL LSATQAALTS SIGHLLTTRG IDAVLVSWQP WSVVATAIVG ALLLQSAYEM APLPASLPAA VSSEPLAGVV IGVALLGGDL RLAPLALVGE VLGLAVMVTG VRTLATSPLI TGQMSRLVAR QAQGRLSRLE EQVHHDLERL RADLRRSRRA GVPGPALRRA RRRLRRDLDR IGAELASLVD ERHRFDDRMR PVAGQVGSNG SRSGERGLLG DDAVPERELL AARRALDTRA DELRRRADRL RGEAGAVLAQ RNHAR
|
| |