Gene Francci3_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2388 
Symbol 
ID3904595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2763732 
End bp2765009 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content75% 
IMG OID637879718 
Producthypothetical protein 
Protein accessionYP_481484 
Protein GI86741084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0574491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0197415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCT ATCTGCTCGG CCTTGGTTCC GCGGTGTGTT TCGCGGTGGC CGCGGTGATC 
CAGCAGCGGG TTGCCTTCCG GGCGCCGCCC GATGACGTCC TGCGGCTGCG GCTGCTGCTG
TGGTTGGTGC GGCGACCGTG GTGGGATGTC GGGGTCGCCG TCGCGGTGAT CGGCAGTGTG
CTGGCCGCGG CGGCGCTGAG CCGGGGCGCG GTGGCCCTCG TCGAATCCCT GCAGATCTGC
CAGCTACTGT TCGCCCTGCC GCTCGCCGCC CTGCTGGCGC AGCGGGCGGT GCCGCGCCGC
GACTGGGCGG CGGCCGCGGC GACGGCCAGT GGCCTCGTGC TCTTCCTGAT CGCCGGAGAT
CCGCATCCGG GCGATCCGGG GGCCGTCTCG ACGTTCGGCT GGGTCCTCGC CGGCGCGGTG
GTCGGCGGGC TGGTGTGCGG TGCGGTGTGG GGGACGCGGC GGCTCGCCGC CGCCCGGCGG
GCCCCGATGC TGGCCACGGC CGTGGGCCTG CTGTCCGCGA CGCAGGCCGC CCTGACCAGC
AGCATCGGTC ACCTGCTGAC CACCCGCGGG ATCGATGCGG TCCTGGTGTC CTGGCAGCCC
TGGTCGGTCG TGGCCACGGC GATCGTCGGT GCGTTGCTGC TGCAGAGCGC CTACGAGATG
GCCCCGCTGC CGGCGTCGCT GCCCGCCGCG GTGAGCAGCG AGCCGCTGGC CGGGGTGGTG
ATCGGGGTGG CCCTGCTGGG CGGCGACCTG CGGCTGGCGC CCCTCGCGTT GGTCGGTGAG
GTGCTCGGCC TGGCCGTGAT GGTCACGGGT GTCCGTACGC TGGCGACGTC TCCGCTGATC
ACCGGGCAGA TGTCGCGGCT GGTGGCGAGG CAGGCCCAGG GGCGGCTGTC CCGGCTGGAG
GAACAGGTGC ACCATGACCT GGAACGGCTG CGCGCCGACC TGCGCCGCAG CCGGCGGGCC
GGCGTCCCGG GGCCGGCGTT GCGACGCGCG CGTCGCCGGC TGCGCCGGGA CCTCGACCGC
ATCGGCGCGG AGCTGGCGAG CCTCGTGGAC GAACGGCACC GGTTCGACGA TCGGATGCGG
CCGGTCGCCG GGCAGGTGGG CTCGAACGGG TCCCGATCGG GGGAGCGGGG CCTGCTGGGG
GACGACGCCG TGCCGGAAAG GGAACTGCTC GCCGCGCGAC GTGCTCTCGA CACCCGGGCG
GACGAGCTTC GCCGGCGGGC GGATCGACTG CGCGGTGAGG CCGGTGCCGT CCTGGCTCAG
AGGAATCATG CGCGATAG
 
Protein sequence
MATYLLGLGS AVCFAVAAVI QQRVAFRAPP DDVLRLRLLL WLVRRPWWDV GVAVAVIGSV 
LAAAALSRGA VALVESLQIC QLLFALPLAA LLAQRAVPRR DWAAAAATAS GLVLFLIAGD
PHPGDPGAVS TFGWVLAGAV VGGLVCGAVW GTRRLAAARR APMLATAVGL LSATQAALTS
SIGHLLTTRG IDAVLVSWQP WSVVATAIVG ALLLQSAYEM APLPASLPAA VSSEPLAGVV
IGVALLGGDL RLAPLALVGE VLGLAVMVTG VRTLATSPLI TGQMSRLVAR QAQGRLSRLE
EQVHHDLERL RADLRRSRRA GVPGPALRRA RRRLRRDLDR IGAELASLVD ERHRFDDRMR
PVAGQVGSNG SRSGERGLLG DDAVPERELL AARRALDTRA DELRRRADRL RGEAGAVLAQ
RNHAR