| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2347 |
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| Symbol | |
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| ID | 3904554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2719661 |
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| End bp | 2722411 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879677 |
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| Product | transposase Tn3 |
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| Protein accession | YP_481443 |
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| Protein GI | 86741043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.669911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.26387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGTGG AGTTCCTGAC GGATGAGCAG GTTGCGGCGT ACGGGCGGTT CGATGGTGAA
CCTGTGCGGG CTGAGTTGGA GCGGTTCTTC TTTCTGGATG ACGCCGACCG GGAGCTCGTC
GTCCGGCGCC GGGGCGAGCA CTCGCGTCTG GGGTTCGCCG TTCAGCTGGG CACGGTGCGG
TTCCTTGGGA CGTTCCTGAG CGATCCGCTG GAGGTGCCGT GGGTGGTGGT GGACTATCTC
GCGGGCCAGC TGGACGTTGC GGACTCGTCG GTGGTGAAGC GGTACACCGA GCGGCTGCCG
ACGCAGCATG AGCATGCTCG GGAGATCCGG TCGGTCTACG GCTACCGGGA CTTCGCCGAC
CCGCAGGCAG CCACGGAGCT GCGGGCGTTC CTGGCGAGCC GGGCGTGGAC GCAGGCAGAG
GGTCCGGTGG CGCTGTTCGG TCAGGCCACG GCGTGGCTGC GCCGTAGCCG GGTGCTGTTG
CCAGGGGTGA GTGTTCTGGC CCGTCTGGTG GTCTCCGTGC GCAGCGAGGC CACCGACCGG
GTGCACCAGG AGCTCGCCGT CGCGGCTGAG CAGGCCGATC CGCAGTTGGC CGGACGGCTG
CGCAGTCTCC TCGAGGTGGC GCCGGGTGCC CGGGTAAGCG AGCTGGAGCG GCTGCGGCGG
GGGCCGACGC GGACGTCGGG GCCGGGCTTG GAGCGGGCGC TGTCACGGGC CGGCGAGGTC
ATCGTGGTGG GCGCCGGCGC GGCGGATGTG TCGGGGGTGC CAGCGAACCG GCTGGCGACG
CTGGCCCGCT ACGGCCTGGC GGCCAAGGCG CCGCTGCTAC GCGAGCTCGC CGAGCCGCGG
CGTACCGCGA CCCTGCTGGC GACGGTGCGC GGTCTGGAAG CGGCGGCGGT CGACGACGCC
CTGGACCTGT TCGACGTGCT GATGGCCACC CGGCTGCTCA ACCCGGCGCG TCGCGCCGCG
CAGCAGGAAC GCCTCGCCGT CCTGCCGAAG CTGGAGAAGG CGTCGGTCAC CCTCGCCGGC
GCGGCGTCCG CGCTGCTGGG CCTGCTGGCC GGCACGGCCG GCGAGGCGCT CGACGTCGCC
GCAGCCTGGG CGGTCGTGGA GCAGGTCGCG CCGCGGGAAC GGGTGCTGGA GGCCGCCGCT
CTGGTCGAGG AGCTGGTGCC CGGCGACGCC GGCCTGGAGA CGGTGATGCG CGCCGAGCTG
GCCCGCCGTT ACGGCACGGT CCGCCCTTTT CTCCTCCTGC TCGCCGAGGC GCTGCCGCTG
GCAGCGACCG GCGACGGCCA GCCGGTCCTC GACGCGGTCC GGCTACTGCC GAACCTGGTC
GGCCGTCGCC GGATCCGCCC GGACGAGGTC GACATCGATC TGGTGCCGCC GGTGTGGCGG
CGCGCGGTGC TGGCCAACCC GACGTTGCCG GCTGGCACGG TCGACCGCGA CGGCTACGTG
CTGTGCGTGC TGGAGCAGCT GCATCGGGCG CTGCGCCGGC GCGACGTGTT CGCCGTGCGT
TCGCAGCGAT GGTCTGACCC GCGGGCCCGG CTGCTCGCCG GCGAGGGATG GGATCGGGTC
CGCGGCGAGG TGCTCGCCGG TCTCGGCCTG GCCGCCCCGG TCGAGACCCA CCTGCGTGAG
CTCGCCGGCT CGTTGGACGC CGCGTGGCGC CAGACCGTCG ACCGGCTCGC CGAGGCCGGA
CCGGACAGCC CGGTGCGGGT CGAGCCGGCG GCCGACGGGC GGATGCGCCT GGCCGTGAGC
CGGCTGGAGG CGCTCGGGGA ACCGGACAGC CTGGTCGCGC TGCGGGCGAC AACCGCGGCG
ATGCTGCCCC GTGTCGACCT GCCCGATCTG CTGCTGGAGG TGCACGCCTG GACCGGGTTC
CTCGGCGCCT ACACCCATCT GGGCGGGTCG GGCAGCCGGA TGGAGAACCT GCACATCTCC
CTCGCAGCGC TGCTGGTCGC CGAGGCATGC AACGTCGGGC TGACCCCGGT GACCAAGCCG
AGCGAGCCGG CGCTGAGCCG CGACCGGCTC TCCCACGTCG ACCAGAACTA CCTGCGCGCC
GACACCCACG CCGCGGCGAA CGCGGCTCTG ATCACCGCCC AGGCACAGAT CGGGCTCGCC
CAGGCATGGG GCGGGGGGCT GGTCGCCTCC GTCGACAGAC TGCGGTTCGT CGTCCCGGTC
CGCACGATCA ACGCAGGACC CAGCCCCCGC TACTTCGGGC TCAAACGCGG CGTGACCTGG
CTGAACGCGG TCAACGACCA GGTCGCAGGG ATCGGCGCGG TCGTCGTGCC CGGCACTGTC
CGTGACTCGC TCTACATCCT GGACACGCTG CTCACCCTCG ACGCCGGGCC GAAGCCGGAG
ATGGTCGCGA CCGACACCGC CAGCTACTCC GACATCGTCT TCGGCCTGTT CCGCCTGCTC
GGCTACCGGT TCTCCCCGCG GATCGCGGAC CTGTCCGACC AGCGACTGTG GCGTGCCACC
CTGCCCGGCG ACGCCGAGGG CGACTACGGG CCGCTGAACG CCATTGCCCG GCACCGGGTC
AACCTCGCCC GCGTCGGTGT CGTGCTGTGG AACACCCGCT ACCTCGACGC CGCCCTCACC
GCACTGCGCA CCGCAGGCCA CGACGTGCAC GACCTCGACG TCGCCCGGCT GTCCCCGCTG
GCCGACCGGC ACATCAACAT GCTCGGCCGC TACGCCTTCG CCGCCCCGCC CACCGGCACG
GGTCTGCGCC CTCTGCGTGA CCCGGGCGAG AACGATCAGG AGGAGTCATG A
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| Protein sequence | MPVEFLTDEQ VAAYGRFDGE PVRAELERFF FLDDADRELV VRRRGEHSRL GFAVQLGTVR
FLGTFLSDPL EVPWVVVDYL AGQLDVADSS VVKRYTERLP TQHEHAREIR SVYGYRDFAD
PQAATELRAF LASRAWTQAE GPVALFGQAT AWLRRSRVLL PGVSVLARLV VSVRSEATDR
VHQELAVAAE QADPQLAGRL RSLLEVAPGA RVSELERLRR GPTRTSGPGL ERALSRAGEV
IVVGAGAADV SGVPANRLAT LARYGLAAKA PLLRELAEPR RTATLLATVR GLEAAAVDDA
LDLFDVLMAT RLLNPARRAA QQERLAVLPK LEKASVTLAG AASALLGLLA GTAGEALDVA
AAWAVVEQVA PRERVLEAAA LVEELVPGDA GLETVMRAEL ARRYGTVRPF LLLLAEALPL
AATGDGQPVL DAVRLLPNLV GRRRIRPDEV DIDLVPPVWR RAVLANPTLP AGTVDRDGYV
LCVLEQLHRA LRRRDVFAVR SQRWSDPRAR LLAGEGWDRV RGEVLAGLGL AAPVETHLRE
LAGSLDAAWR QTVDRLAEAG PDSPVRVEPA ADGRMRLAVS RLEALGEPDS LVALRATTAA
MLPRVDLPDL LLEVHAWTGF LGAYTHLGGS GSRMENLHIS LAALLVAEAC NVGLTPVTKP
SEPALSRDRL SHVDQNYLRA DTHAAANAAL ITAQAQIGLA QAWGGGLVAS VDRLRFVVPV
RTINAGPSPR YFGLKRGVTW LNAVNDQVAG IGAVVVPGTV RDSLYILDTL LTLDAGPKPE
MVATDTASYS DIVFGLFRLL GYRFSPRIAD LSDQRLWRAT LPGDAEGDYG PLNAIARHRV
NLARVGVVLW NTRYLDAALT ALRTAGHDVH DLDVARLSPL ADRHINMLGR YAFAAPPTGT
GLRPLRDPGE NDQEES
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