Gene Francci3_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2342 
Symbol 
ID3904549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2715939 
End bp2716403 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID637879672 
ProductNUDIX hydrolase 
Protein accessionYP_481438 
Protein GI86741038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.34625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.325701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGGCC GTGCGGCGTT TCAGGTTCTG GTCCTGCCCT ACCGGCAGAC CGGGCAGGGC 
ACGGAGTACG CCTTGTTCCG GCGTGCTGAT GCCGCCTATT GGCAGGGTGT CGCCGGTGGT
GGTGAGGCGG GTGAGTCCCC GGCGCAGGCA GCCCGGCGGG AAACCGCCGA GGAGGCCGGT
CTGGTCGGCG AACGTGAGTT CATCGTGTTG GACGCGCGGG CCACGATCCC CGTCGTCTAC
GTCACCGGGG AGTTCACCTG GGGGCCGGAC GTGCTGGTGA TCCCGGAGTA CGCGTTCGGT
GTCCGTGCGG AGGACGCCGA GGTGACGTTG TCGGACGAGC ACACCGAGTT CGGCTGGTTC
GGCCTCGACG ACGCGGTGAA GGTCGTGCAG TGGGATTCCA ACCGCACCGC TCTGTGGGAG
CTGGACCATC GGCTACGCCA CGGCATCGGT CACCGCGCCG CCTGA
 
Protein sequence
MGGRAAFQVL VLPYRQTGQG TEYALFRRAD AAYWQGVAGG GEAGESPAQA ARRETAEEAG 
LVGEREFIVL DARATIPVVY VTGEFTWGPD VLVIPEYAFG VRAEDAEVTL SDEHTEFGWF
GLDDAVKVVQ WDSNRTALWE LDHRLRHGIG HRAA