| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2295 |
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| Symbol | |
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| ID | 3904829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2674644 |
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| End bp | 2676341 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879626 |
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| Product | lignostilbene-alpha beta-dioxygenase and related enzymes-like |
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| Protein accession | YP_481392 |
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| Protein GI | 86740992 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.251265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0207364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCACG CGCTCTACCA TGTCCTCGAA CCAAGTCGCG AGTATGACGT CGAGCTGACC
ACAACTGCCG GGCAGTGGCC GGCCGGCCTG CGCGGACACG CCTTCGTCGT CGGTCCGTCC
CAGCCGACCG CGCTCGATTT CTTCCTGACC GGGCCGGGCA TGCTCACCCG GGTCGACCTG
GCCACCCAGC GCTGGCAGAC GCGCCGGGTC GTCACTCCGG ACCTGGCCAT TCTCGGCGCG
CTGCGCTCGG TGCTGCCGCC GGCGGAGCTG GCCGGGTTGC TGGTGGGCGC GCGACCGGCG
GTGAGCCACA CCGCGCCGCA TTTCTTCGGC GACCGGCTGC TGTTGACCTC CGATCGGCAG
CGGCCGGTGG AGTTCGATCC GGTCACCTTT GATTTCAAGA GTTTTCTCGG TGGCGTGGAC
GAATACCCGC AGGTCGGCGC GCACCCGCTG TTCCCGGGTG TGCAGACGAC GTCCCATCCG
GTCGTCGACC TGGACGACGG TTGCCTGTGG TGGTGCAACA TCCACCTACG CCCCCGGGGA
AATTCGACGG CCGATGTCGA GGGGCCGCTG TGGGTGGTGC GCTGGGACGG CAGCGGCGCG
TTGGAAAGCT GGCATGTACC GGGCGCCCGC ATCGTGCAGG GCACCCACGA GGTGACGGTG
ACCAGGGACT ACGTCATCTT CACCGAAATC GGTTTCCGGC CCGAGCCGGG CAGCGTCGCC
GGCCGGAACC GGACCAGGCC GCACCAGCCG TTCACCGATA TCTATCTGGT GGCGAAGAGG
GATCTGACCA CCAGGCGGGT GGGGGGCGCT GTCCCCGTGG CGCACGCCCG GGTGCCCTAC
GAGTCGTTCC ACGAGTTCGC CGACTACGCC CAGGACGGCG ACGACATCAC CCTGTACGTC
GCCCACTCGA ACGGCTGGGA CATCAACTAC GCGATCACCG ACACCGACAC CGTCTGGGGG
TCCGGGAAGC ACTTCCCGGC CAGCCTGCGC GGATTTCTCC CGACGCCGGT CGACGCCTCA
CCGGTGGGTC GGTACGTCAT CGCCGGACGC ACCGGCGAGG TACGCGCCAC CCGGTACTTC
CTCGAGCCCC GGCGGCACTG GGGCACCCTG CTCTACGCCA GGGACCTGCG ACGCCCGGCC
CTGGAACGCG GCCGGTACCT GTGGCAGGCG TATTGGGGAG CACCGCCGGA CAGCCTGGTC
AGCCGGGTCG TCGAGATGTA CCGCGACCAC CCGCACCGGG TCGTGCCGGT GGATCAGCTG
CCGGCCGGCG GGACTGCCTC GTCGGTGGTG TGCATCGACC TCGAGACGAT GACGGAGAAG
TGCTCGTGGT CGTTTCCGAC CGGCACCATC GGCGAGTCGC CGGTGTACGT GCCGGTCACC
GGCGACGGCG ACGTCGCGCC CGGCGGAGAG AACGGCGATG GTAGCGGGGA CGGATGGCTG
CTGGTCTTCC TCAAGCACGC CGACCGCACC GAGATCCAGG TCTTCGACGC GCTCGCGCTC
GATGCCGGCC CCGTCGCCGT CGCCACCGCG CCCGGGCTGA AGATTCCGGT TCTGTTCCAT
TCCGGGTATG CGGCGAGCAT CCGGTCCGTC GACACCGGAT ATCGCCGGTT CTTCGCGGAC
GACCTCGGTA CCGCCTGGAG AAGTCTCGGG CCGACCGTGC GCAGGGTCGT CGCCGACGTC
CTGGACCGGC TCGGCTGA
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| Protein sequence | MDHALYHVLE PSREYDVELT TTAGQWPAGL RGHAFVVGPS QPTALDFFLT GPGMLTRVDL
ATQRWQTRRV VTPDLAILGA LRSVLPPAEL AGLLVGARPA VSHTAPHFFG DRLLLTSDRQ
RPVEFDPVTF DFKSFLGGVD EYPQVGAHPL FPGVQTTSHP VVDLDDGCLW WCNIHLRPRG
NSTADVEGPL WVVRWDGSGA LESWHVPGAR IVQGTHEVTV TRDYVIFTEI GFRPEPGSVA
GRNRTRPHQP FTDIYLVAKR DLTTRRVGGA VPVAHARVPY ESFHEFADYA QDGDDITLYV
AHSNGWDINY AITDTDTVWG SGKHFPASLR GFLPTPVDAS PVGRYVIAGR TGEVRATRYF
LEPRRHWGTL LYARDLRRPA LERGRYLWQA YWGAPPDSLV SRVVEMYRDH PHRVVPVDQL
PAGGTASSVV CIDLETMTEK CSWSFPTGTI GESPVYVPVT GDGDVAPGGE NGDGSGDGWL
LVFLKHADRT EIQVFDALAL DAGPVAVATA PGLKIPVLFH SGYAASIRSV DTGYRRFFAD
DLGTAWRSLG PTVRRVVADV LDRLG
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