Gene Francci3_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2282 
Symbol 
ID3904816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2662235 
End bp2663584 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content76% 
IMG OID637879613 
Productmajor facilitator transporter 
Protein accessionYP_481379 
Protein GI86740979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000302645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000646359 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTCCC AACCCATCGC CACCGGCCTT CCCGCCGACC AGACCGGCCA GACCGGCGCC 
GCCGGTTACG GGACCCCGTC CTCGGCCACC GCCCCGGTAC CGGCGGTGGC CCTGCCGCGG
CAGGCCGCGG CCCGCGACGC CCCGTCCGAC CCGGGCGCGG CGCCCCACCG GGGCAGGCTG
TCCCCGCGCG CCGGATTCCT CCTGCAGACG TCGATGATCG GCTCGTTCCT CGCCGCGTCC
TCGGCCCCCA CCCCCCTCTA CCCGGTCTAC CAGGCCCGCT GGGGGTTCTC CCCGATCACC
GTGACCGTCG TGTTCGCCGT GTACGCCCTG GCCGTCCTCG CTGCGCTGCT CACCGTCGGA
GCCCTCTCCG ACCACATCGG GCGCCGTCCG GTGCTGCTCG CCTCCTCGCT GCTGCTCGCC
GCCGCCCTGG CGGTGTTCGC CACCGCCGGC GGGGTGGGGG AACTGACCGT CGGCCGCGTT
CTGCAGGGCC TGGCGACCGG CGCCGCCAGT GGCGCCCTCG GCGCCGGCCT GCTCGACCTC
GACCGGGCCC GCGGCACCCT GGCCAACGGA GTCGGCCCGT TCACCGGCCT GGCCCTGGGC
GCCCTCGGGT CCAGTCTGCT CGTGGCCTAC CTGCCCGCTC CCACCCGTCT GGTCTACCTG
GTGCTGTGCG CGATCGTGCT CGCCCAGGCG GTCGGGGTCG CGGCGATGCC CGAGACCGCA
CCGCGCATCC CCGGAGCGCT CGCGTCGCTG CGCCCGACCA TCGGCGTACC CGCCGCCGCC
CGCCGCGACC TGCTGATCGC CGCGCCCTGC CTGGTCGCAT CCTGGGCCCT GAGCGGGTTC
TACCTCTCCC TCGGCCCGAG CCTGGCCCGT CTCGTCGTCG ACTCCCGCTG GGTCGTGCTG
GGAGGTCTCG CGGTCTTCGC CCTCACCGTG ACCGCGGCCC TGACGGTGCT GCTCCTGCGC
GACACCGCTG CCCGTACCGT GATGTTCCTC GGTGCCCTGG GCCTGCTCGT CGGCGTCGGT
GTCACCCTGC TCGGCGCGGA CCTTCCCTCC ACCCCGACGT TCTTCGTCGG CACCACGCTG
GCCGGTATCG GTCTCGGCGC CGGTTTCCAG GGCGGCCTGC GCGTCCTGAT CCCCCTGGTC
GCCCCGCACG AACGCGCCGG CCTGCTCTCG ACCGTCTACG TGCTGTGCTA CCTCGCCTTC
GGCGTCCCCG CGGTCGTCGC CGGCTACCTG GTCACCCACC ACGGGCTGCT GCCCACCGCC
CGCGGGTACG GCCTGGTCGT CATGGCCCTC GCCGCGCTGG CGCTTCTCGG CCTGCTCACC
CGCGCCCGGC GCCCGGCGCC CGGCGCCTGA
 
Protein sequence
MSSQPIATGL PADQTGQTGA AGYGTPSSAT APVPAVALPR QAAARDAPSD PGAAPHRGRL 
SPRAGFLLQT SMIGSFLAAS SAPTPLYPVY QARWGFSPIT VTVVFAVYAL AVLAALLTVG
ALSDHIGRRP VLLASSLLLA AALAVFATAG GVGELTVGRV LQGLATGAAS GALGAGLLDL
DRARGTLANG VGPFTGLALG ALGSSLLVAY LPAPTRLVYL VLCAIVLAQA VGVAAMPETA
PRIPGALASL RPTIGVPAAA RRDLLIAAPC LVASWALSGF YLSLGPSLAR LVVDSRWVVL
GGLAVFALTV TAALTVLLLR DTAARTVMFL GALGLLVGVG VTLLGADLPS TPTFFVGTTL
AGIGLGAGFQ GGLRVLIPLV APHERAGLLS TVYVLCYLAF GVPAVVAGYL VTHHGLLPTA
RGYGLVVMAL AALALLGLLT RARRPAPGA