Gene Francci3_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2274 
Symbol 
ID3904808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2652725 
End bp2653135 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content70% 
IMG OID637879605 
ProductAsnC family transcriptional regulator 
Protein accessionYP_481371 
Protein GI86740971 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000321724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000620833 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTGCC GAGATGGGCG TATGAGCTTC ACCGACCTCG GCCGAGCCAC CGGCCTGTCG 
GTCTCCGCCG TCCATCAGCG CGTCCGACGC CTGGAACAGC GTGGAGTGAT CACCTCCTAC
ACGGCGCTCG TCGACCCCGC CCAGGTCGGC CTGCCCCTGA CCGCCTTCAT CTCGATCACA
CCGATCGACC CGAGCCAACC CGACGACGCC GCCGACCGGC TCGCCCACAT CGTCGAGATC
GAGGCCTGCC ACAGCGTCGC CGGCGACGAG AGCTACCTGC TCAAGGTGCG AGTCGCCACC
CCCGGCGACC TCGAGACGCT GCTGCAGCAG ATCCGCGCCG CCGCGAACGT CTCCACCCGC
ACCATGGTCG TGCTCTCCAC CCCCTACGAA GGACGCCCCC CCGCCCTGTG A
 
Protein sequence
MLCRDGRMSF TDLGRATGLS VSAVHQRVRR LEQRGVITSY TALVDPAQVG LPLTAFISIT 
PIDPSQPDDA ADRLAHIVEI EACHSVAGDE SYLLKVRVAT PGDLETLLQQ IRAAANVSTR
TMVVLSTPYE GRPPAL