| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2239 |
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| Symbol | |
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| ID | 3905007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2610405 |
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| End bp | 2612531 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637879570 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_481336 |
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| Protein GI | 86740936 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0220335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAGG TAAGTGTTGA CATCGGTGGC ACGTTCACCG ACTGCTTTCT TGTTTACGAC
GACACCTACA TCGAGGCGAA GTCGCTGACC ACGCACCACA ACCTCGCCTC CGGCTTCATG
GATGCCCTGG CAAAGGCCAG TGCCCAGGCG GACCTGGATG TGCAGACGGT GCTCTCGACC
GTCGACGCGG TGCGTTACGC CACGACCCTC GGGACGAACG CGCTCATCGA ACGCAGCGGT
CCGGCGGTCG GCATCCTCAC CACCGCCGGT TTCGAATCGA CCGTGCCGTT GATGCGGGCC
CGTGGCTACG GCGACGGGCT GACCGAGGCC CAGCAGTCCG ACCTGCCCGC CGCGGACCGG
CCGGTGTCGC TGGTGCCGGT GACCCGGATC GCCGGCGTGC AGGAACGCGT CGACTACGGC
GGCACGGCGG TGCTGTCCAT CGACGAGGAC GACGTGCGCC GCCAGGTGCG CAAGCTGGTG
GACGAGGGCG CGCAGGCGTT CGTGGTCGCG CTGGTCAACG CGGTGATCAA CCCGGCCCAC
GAGAAGGAAG TCGAGCGGAT CATCCTCGAC GAGTACCCCA CGCACATGCT GGGGGCGATC
CCGATCGTGC TGTCGCACCG GGTGACCGGC CGCAAGGGTG AGTACGCCCG GACCATGTCG
GCGGTCATCG ACGCCTACCT GCACAGCCAG ATGTACCACG GGCTGGCGTC GCTGGAGATC
GAGCTGCGCC GCAACGGCTA CACCAAGCCG ATGCTGCTGG TGCACAACAC CAGCGGCATG
GCCCAGCTGA ACTCGACCTC CTCGCTGCAG ACCATCCACT CCGGGCCGGT CGCCGGGCTG
GAGGCCACCA ACTACCTGTC GAAGACCTAC CACCAGCCCA ACATCATCGC CACCGACATG
GGCGGCACCA GCTTCGACAT CGGCCTGGTC ACCTCCGACG GGGTGAAGTT CTACGACTTC
AACCCGGTCA TCGACCGCTG GCTCGTCTCC ACCCCGATGA CCTACCTGCA CACCCTCGGC
GCCGGCGGTG GCTCCATCGC CCGCTACGAC CGCCTGTGGG AGGCCATCGA GGTCGGCCCG
GAAAGCGCCG GTTCCGACCC GGGCCCGGCC TGCTACGGCC GGGGCGGGCG GTTCCCGACC
ACCACGGACG CGAACCTGGT GCTGGGCTAC CTCGACGCGG ACAACTACGC CGGTGGCACG
ATCAAGCTCA GCCTGCGCCG GGCGCAGCGG GCCATCGAGG AGCACATCTG CAAGCCCACC
GGACTGAGCC TGATCGAGGC GGCGAAGGCG ATCAAGCGCA AGGTGGACAG CAACATGGCC
AACGCGATCT TCAAGGAGGT CGCGGTCAAG GGCTATAACC CGAAGAACTT CGTCGCGCTT
AGCTACGGCG GCGGTGGTCC GCTGCACGCC TGCGGATACG CCAACACGCT GGGCATCCAG
AATGTGCTGA TCCCGCCGTT CAGCTCGGTG TTCTCCGCGC TGGGCGCCGG CAATATGAAC
CAGCTGCACA TTCATGAGTA CTCGCTGTAC CTGATGGTCT ACGACGCCAC CACCCGCAGG
ATGTTGGACG ACTTCCAGGT CTTCAACGAC ACGGTGACGG AACTTGCCGC GAAGGGCCGC
GACGACCTCC TCCGCCAGGG CGCCGACCCC GCCAACATCC GCTCGCGGGT GGAGCTGGAC
ATGCGCTACG GCAACCAGCT CGCCCAGATC GGGGTGGTGT CGCCGTTCGA GCGGCTCACC
TCACACCGCG ACGTGATCGA GCTGCTGGAC CTGTTCAGCA GCATCTACGC CAAGCGGTAC
GGCGAAGGCA GCCAGGCGCC CGAGGCCGGT GTGCGCATCA ACGTCATCCG CGTGGTCAGC
TACGTCGAAC GCGACAAGTT CGACCTGCAG CCCACCCAGG CCGAGCCGCG CCCCGCGTCG
AACCCCGCCC GGTGGCGGGA ATGCCACTAC CCGGGCATCG ACGGCGCGGT CAAGACTGCC
GTCTACGACT TCGCCGACCT CGAAGAAGGC CACGTCATCG AGGGCCCCGC CCTGATCGAA
ACCCCGAGCA CGACCTACCT CGCCGAACCC GGATGGCAGC TGACCATCGG CCGTACCGGC
TCCGCGGTGC TCGTTCGGAC CATCTGA
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| Protein sequence | MRQVSVDIGG TFTDCFLVYD DTYIEAKSLT THHNLASGFM DALAKASAQA DLDVQTVLST
VDAVRYATTL GTNALIERSG PAVGILTTAG FESTVPLMRA RGYGDGLTEA QQSDLPAADR
PVSLVPVTRI AGVQERVDYG GTAVLSIDED DVRRQVRKLV DEGAQAFVVA LVNAVINPAH
EKEVERIILD EYPTHMLGAI PIVLSHRVTG RKGEYARTMS AVIDAYLHSQ MYHGLASLEI
ELRRNGYTKP MLLVHNTSGM AQLNSTSSLQ TIHSGPVAGL EATNYLSKTY HQPNIIATDM
GGTSFDIGLV TSDGVKFYDF NPVIDRWLVS TPMTYLHTLG AGGGSIARYD RLWEAIEVGP
ESAGSDPGPA CYGRGGRFPT TTDANLVLGY LDADNYAGGT IKLSLRRAQR AIEEHICKPT
GLSLIEAAKA IKRKVDSNMA NAIFKEVAVK GYNPKNFVAL SYGGGGPLHA CGYANTLGIQ
NVLIPPFSSV FSALGAGNMN QLHIHEYSLY LMVYDATTRR MLDDFQVFND TVTELAAKGR
DDLLRQGADP ANIRSRVELD MRYGNQLAQI GVVSPFERLT SHRDVIELLD LFSSIYAKRY
GEGSQAPEAG VRINVIRVVS YVERDKFDLQ PTQAEPRPAS NPARWRECHY PGIDGAVKTA
VYDFADLEEG HVIEGPALIE TPSTTYLAEP GWQLTIGRTG SAVLVRTI
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