Gene Francci3_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2233 
Symbol 
ID3906372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2604825 
End bp2605226 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content73% 
IMG OID637879564 
ProductCopY family transcriptional regulator 
Protein accessionYP_481330 
Protein GI86740930 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.375979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC GGCGGGAGCC GGGAGCGCTC GAACGAGAGG TGCTCGCCGC GATCGCGGCG 
GCCGGCCGGC CGCTCACCCC GACCGAGACG CTCGCCGAAC TCGGCGAGCC GCTGGCCTAC
ACCACCGTGA TGACCACGCT GGCCCGGCTG CACGACAAGG GCGCACTCAC CCGGCAGCCC
GCCGGCCGCT CCTACGCCTA CACGCTGGCC GCCGAACCGG AAACCCTCGA CGCCGCACTC
ACCGCCCGCC AGATGACCCG CCTGCTCGGC GCTGGCGCCA ACCGGGCTGA AGCCCTGGCC
CGCTTCGTCG CGGATCTGCG TCCCGAAGAC GAACAACTCC TCGCCGACAT CCTCGCCAGC
CACCACCCGC GGTCAGAGAC GGACGGCGGG CAGGGGCTAT GA
 
Protein sequence
MAKRREPGAL EREVLAAIAA AGRPLTPTET LAELGEPLAY TTVMTTLARL HDKGALTRQP 
AGRSYAYTLA AEPETLDAAL TARQMTRLLG AGANRAEALA RFVADLRPED EQLLADILAS
HHPRSETDGG QGL