| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2232 |
|---|
| Symbol | |
|---|
| ID | 3906371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2603902 |
|---|
| End bp | 2604828 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637879563 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_481329 |
|---|
| Protein GI | 86740929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.396208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG TCGCGCTGAT CCCGTTGGCC ACGAACCTGC TGCTGGCCGT CAGCGGCGGC
TGGCTCGGCC GGCGGTTGCC GCCCGCCGCC GCCACCCGGC TGCTGACCCT GGCCTGTCTG
GTCACCGCGT TGGCCACCGG ATTCGTCCTG GCCGTCGCCG CCTTCACCCT GCTCGCCCAG
CTGCCCCTGC TCACCGCGGT CGGGCACTGG TCGGCCACCA TGATCCGCGG CCACGACCCG
CTACCCGCCG CGGCCGGGCT GGTGCCGGCC GCCGTCGTCG TCGGGCTGCT CGCCGCCGCC
GCCCGGCGCG CCGCCGCCCT CGGCCAGGAC CTCGCCGCCG CGGAACTCAC CTGCCGGCGG
CTCGGACCGT CGCCTACCGG CCTCGTCATC GTCGAGGACG ACCACCCCGA CGCCTACACG
CTGCCCGGAC TGACCGGCCG GATCGTGGTG TCCACCGCCA TGCTGCGCGC GCTGCCCGCC
GACGAACGCC GCGTGCTACT CGCCCATGAA CGCTCCCACC TGCATCACCG CCACCACGCC
TACACCCAGC TCGCCGACCT CGCCGCCGCC GCCAACCCGC TGCTGCGGAC ACCCGCCGCC
GCCGTGCGCC TCGCCGTCGA ACGCTGGGCC GACGAAGACG CCGCCGCTGT CACCGAAGAT
CGCGCTGTGG TCGCCCGGGC CTTGGCCCGC GCCGGCCTCG CCCGCACCGG CATGCCGACC
ACTCCGACCT CGGCACTCGG CGCCGTGCAC ACCGACCTCA CCCACCGGGC GCGGGCGCTG
CTGGACCCGC CTCCCAAACC ACGCCCCGCC CTGGCCGTTG CCCTCGCCGC GCTCGTCCTG
GCCACGGCCG CCGCCGCCGC CGACACCGCC CACACCACCG AGCACCGCTT TGAACACGCG
CAGGCAGCCT ATGCGCACCG ATCCTGA
|
|---|
| Protein sequence | MTAVALIPLA TNLLLAVSGG WLGRRLPPAA ATRLLTLACL VTALATGFVL AVAAFTLLAQ
LPLLTAVGHW SATMIRGHDP LPAAAGLVPA AVVVGLLAAA ARRAAALGQD LAAAELTCRR
LGPSPTGLVI VEDDHPDAYT LPGLTGRIVV STAMLRALPA DERRVLLAHE RSHLHHRHHA
YTQLADLAAA ANPLLRTPAA AVRLAVERWA DEDAAAVTED RAVVARALAR AGLARTGMPT
TPTSALGAVH TDLTHRARAL LDPPPKPRPA LAVALAALVL ATAAAAADTA HTTEHRFEHA
QAAYAHRS
|
|---|
| |