Gene Francci3_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2225 
Symbol 
ID3906364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2599119 
End bp2599607 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content70% 
IMG OID637879556 
ProductMarR family transcriptional regulator 
Protein accessionYP_481322 
Protein GI86740922 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.582013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TGGCACCCTC CCGCGCCGGA CCAGACTTGT CGTTCCTGCT GGACCACGCC 
AGTCATGCCC TGCGGACCCG GATGGCGGCC GCGCTCGCCG AGATCGGTCT CACCGCACGC
ATGCACTGCG TGCTGGTGCA TGCCCTGGAG GAGGAGCGCA CCCAGATCCA GCTCGCCGAG
ATCGGCGACA TGGACAAGAC AACGATGGTG GTCACCGTGG ACGCCTTGGA GAAGGCCGGC
CTCGCCGAAC GTCGGCCCTC CGCCAGGGAC CGGCGGGCTC GGATCATCGC GGTCACCGAG
GCGGGCGCGC GGATCGCCGC GCGGAGCCAG GAGATCGTCG ATCGGGTCCA TGAGGAGGCG
TTGGCGGCGC TTCCCACCAA GGAGCGGGAG GTCTTCCTGC GGGCGATGAA CCGCTTGATC
GAGGGGCATC TGGCCGGACC AGCGAAGAGC CCTCAGCCGG TCCGGCGGGC CCGCCAGCGG
GCTCAGTAG
 
Protein sequence
MTAMAPSRAG PDLSFLLDHA SHALRTRMAA ALAEIGLTAR MHCVLVHALE EERTQIQLAE 
IGDMDKTTMV VTVDALEKAG LAERRPSARD RRARIIAVTE AGARIAARSQ EIVDRVHEEA
LAALPTKERE VFLRAMNRLI EGHLAGPAKS PQPVRRARQR AQ