| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2194 |
|---|
| Symbol | |
|---|
| ID | 3906794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2566436 |
|---|
| End bp | 2566846 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637879526 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_481292 |
|---|
| Protein GI | 86740892 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.198331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGGTG CAGGCGGTGT CGAGGGCGTC CTGGGGGCTC CCGTCGGTGA AACCCCGGTG
ATCAGCCGAA CGGGAGACCG GAAATCGGTT CTCATGCTCT CCGCGGTCAG CGCCCAGGGA
AAGCTTCATT TCATGCTCCA GCAGGGCGGG TCCGTCGACT CCAAGGTCTT CATAGAATTC
TGCCGGAAGC TGCTCCAAGA CGACGCTGGA AAGGTCTTCC TCATCGTCGA CAACGTCAGT
TACCACGATT CGAAGGCTGT CCGTCGGTTC GTCGCAGGAA CAGACGGTAG GCTCCGGATT
TTCTTTCTCT CGCCTTATGC CTCCGACACC AACCCGGACG AGTGGGTCTG GAACAACGTG
AAGACCGCAC AGATCGGCCG AAAAATGATG GGTGTAGATC CTTCAGAGTG A
|
|---|
| Protein sequence | MDGAGGVEGV LGAPVGETPV ISRTGDRKSV LMLSAVSAQG KLHFMLQQGG SVDSKVFIEF
CRKLLQDDAG KVFLIVDNVS YHDSKAVRRF VAGTDGRLRI FFLSPYASDT NPDEWVWNNV
KTAQIGRKMM GVDPSE
|
|---|
| |