Gene Francci3_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2192 
Symbol 
ID3906792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2565563 
End bp2565895 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content68% 
IMG OID637879524 
ProductDNA polymerase, beta-like region 
Protein accessionYP_481290 
Protein GI86740890 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.479342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCGG AGGAGGTGGG CATGCATCCG TTGATCGAGG CTAGGCGGGC GGAGATCCAG 
GGACTCTGCC GTCGGCTCGG CATCCGCCGC CTCGACCTCT TCGGCTCCGC GACCAGCGAT
GCGTTTGACC TCGACAGCAG CGACGTCGAC GTCCTCGTCG AGTTCGACGC CGGCCGCGAC
GGATTCGACT ACTACGGCAC CTACTTCGCC CTCAAGGAGG GGCTCGAGCG CCTGCTGGGC
CGCGCCGTCG ACGTAGTCAG CGTCACCGCC ATCCGCAACC CCTACTTCCG CGACCAGGTC
ATGCGCACCA GGCAGCCCCT GTATGCCGCC TGA
 
Protein sequence
MSPEEVGMHP LIEARRAEIQ GLCRRLGIRR LDLFGSATSD AFDLDSSDVD VLVEFDAGRD 
GFDYYGTYFA LKEGLERLLG RAVDVVSVTA IRNPYFRDQV MRTRQPLYAA