Gene Francci3_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2187 
Symbol 
ID3906787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2559895 
End bp2560419 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content70% 
IMG OID637879519 
Producthypothetical protein 
Protein accessionYP_481285 
Protein GI86740885 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0800441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACG ATGCCTCGGC CACGCCTGAT GCCGCCGCTG GTCCGGCGAA TCGGAGCGCC 
CTCGGCGGCT TGCTGCGCCG GGCATGGGTC GGCTACCAGA ACCGCCTCGA CGAGCAACTC
GCCGCGGCCG GGTTCGAGCG CCAATTCCCG GACGGTCGGG TACTCCGCTT CTGCGCCGGA
TCGTCGGGCG CGACGGTCGC ACAGATAGGA CGGCATCTCG GCATCACCCG CCAGGGCGCA
GCCAAGATCG TGAATCGCCT GGTCACGTCG GACTACCTGG AGGTCTCACC CTCCGAGACC
AGCGGCCGCG AGAACACCGT GCGGCTCACC CTGCACGGCC AGGCCTACCT CACCACCCAC
CGCGCCGCGG CCCGCCGCAT CGAGGACGAT CTACGCACGG CTCTCGGCCC CGAGGCGTTC
GACAGTCTCA CCCGACTGCT GGCTGCCCTC GGTGCCGGCA GCGACGAACG ACTGACCGGC
TATCTGCGCC GCCGGACGAC TCTGGCGGAC GTACTAGAAC TCTGA
 
Protein sequence
MGDDASATPD AAAGPANRSA LGGLLRRAWV GYQNRLDEQL AAAGFERQFP DGRVLRFCAG 
SSGATVAQIG RHLGITRQGA AKIVNRLVTS DYLEVSPSET SGRENTVRLT LHGQAYLTTH
RAAARRIEDD LRTALGPEAF DSLTRLLAAL GAGSDERLTG YLRRRTTLAD VLEL