Gene Francci3_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2130 
Symbol 
ID3905520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2499613 
End bp2500761 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content64% 
IMG OID637879465 
Producttransposase, IS4 
Protein accessionYP_481231 
Protein GI86740831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGCCG TGGACAGCGA GCGGCTGACC GACCGTATTT CGATCGGTGT GCTCGCCAGA 
ATCGTTCCCC GGGATCTCGT CGATGAAGCG CTGGTGGAGA CGAAACGGCA GGAACGGCGT
ACCAGGCTGC TGCCAGCCCG GGTCATGGTG TACTTCACGA TGGCGATGTG CCTCTTCTTC
GACGATGACT ACGAAGAAGT CATGCGTAAA CTCGCCGGTG CGTTGAGGTG GCTGGGGAAC
TGGAAGGGTG ACTGGCAGGT CCCAACTAGC GGGGCGATCT CGCAGGCACG GATCAGACTC
GGCGCCGCGC CTCTGAAACT GTTGTTTGAA CGTGTCGCGG TGCCGGTCGC GGGGCGGGGT
ACCAAGGGCG CATGGCTGCG TTCCCGGCGG CTGACGGCGA TCGACGGGTT CTTCCTCGAC
GCCGCGGACA CCCCCGAGAA CGTGGCCAGG TTCGGACGGC ACACCAACGG ACACAAGGCC
AGCGCCCTGC CACAGGTCCA TGTTGTCGCG CTCGCCGAAT GCGGCACGCA CGCGATCGTC
GCCGCCGCGG TCGGCCCCCG GGCGAGCGAC GAACGCACCC TCGCCGCCAC TCTCTTCGAC
GCCTGCGAAC CCGGGATGCT CCTCACCGCC GACCGCAACT TCTACGGCCG CGACCTGTGG
CACCAGGCAC TTGACACCGG CGCGGACCTG CTCTGGCGAG TCAGGTCCAA CCTCGCGCTA
CCGGTCATCC AACCGCTCCC TGACGGCTCC TACCTCTCCA TTGTCATCAA TCCGAAACTA
AGCGGGAAAC GGCGGGAACA GCTCATCGTC GACGCCCGCG CGGGCCGCGA TTTTCCCGAG
GACTACGCGA CACCCGTCCG CGTCATCGAA TACACGGTGC CCGACCGCAC CGGAGCCGGC
ACCGGAGAAC TGATCTGCCT CATCACCAAC ATCCTTGACC AAACCGATAT ATCCGCGGTG
GAACTCGCCA CGGGCTACCA TGAGCGGTGG GAAATTGAAA GAATCTTCGA TGAGGTGAAG
ACCCACCAGC GGGGCGAAGC CCGCTCGGTC TCAATAGGTC AGTGCACCAC GTATGAATCC
GGTCATAGAT CGGGTCTGGT AGGAACGTGG CCTACTGATC TGGAGGTTCG GTGCGCGGCG
CGGTGTTGA
 
Protein sequence
MPAVDSERLT DRISIGVLAR IVPRDLVDEA LVETKRQERR TRLLPARVMV YFTMAMCLFF 
DDDYEEVMRK LAGALRWLGN WKGDWQVPTS GAISQARIRL GAAPLKLLFE RVAVPVAGRG
TKGAWLRSRR LTAIDGFFLD AADTPENVAR FGRHTNGHKA SALPQVHVVA LAECGTHAIV
AAAVGPRASD ERTLAATLFD ACEPGMLLTA DRNFYGRDLW HQALDTGADL LWRVRSNLAL
PVIQPLPDGS YLSIVINPKL SGKRREQLIV DARAGRDFPE DYATPVRVIE YTVPDRTGAG
TGELICLITN ILDQTDISAV ELATGYHERW EIERIFDEVK THQRGEARSV SIGQCTTYES
GHRSGLVGTW PTDLEVRCAA RC