Gene Francci3_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2127 
Symbol 
ID3905517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2497503 
End bp2498177 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID637879462 
Productputative transposase 
Protein accessionYP_481228 
Protein GI86740828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGC CGGTACGGGC ACGGCGGCTG ACCGATGAGG AAGGCCAACG ACTCCAAGCG 
ATCGCGCGCC GCGGGAAACA CGGCGCGATC CGAGTCCGCC GCGCACTGAT CATCATGGCG
TCGGCGAGTG GGACCCCGGT CCCCGCGATC GCTCGTCTCG TCGCGGCGGA CGAGGACACG
GTCCGGGGGG TGATCCACCG GTTCAACGAG ATCGGCCTGG ACGCGTTGGA CCCTCGTTGG
GCGGGAGGCC GTCCCCGCCT GATCAGCTCT GACGACGAGG TGTTCGCCGT GGCGACGGCC
CGCACCCGCC CGGAGAGACT CGGGCAGCCG TTCACGCACT GGAGCCTGCG CAAGCTCGCC
GCCTACCTGG CCGACAACCC CGACCGCACC GTCACCATCG GTCGGGAACG GCTGCGGCAG
CTCCTGCACC ACCATCGGAT CTCGTTCCCA CGCACGAGGA CGTGGAAGGA GTCCACCGAC
CCGGACAAGA ACCGCAAGCT CGACCGGATC GAGTACCTCA CCGGCACCTG TCCGAACCGG
TGCTTCGCGT TCGACCAGTT CGGACCGCTA CTGAAACGTC CCGGCTTCGT CAGGGCTGCT
CCCACCCAGA CCGGCACTAC CCGGACCAGG CAGCCCTCAG CTCCACCCAC CCTGCAGCGA
CAGGGCAGAC GGTGA
 
Protein sequence
MARPVRARRL TDEEGQRLQA IARRGKHGAI RVRRALIIMA SASGTPVPAI ARLVAADEDT 
VRGVIHRFNE IGLDALDPRW AGGRPRLISS DDEVFAVATA RTRPERLGQP FTHWSLRKLA
AYLADNPDRT VTIGRERLRQ LLHHHRISFP RTRTWKESTD PDKNRKLDRI EYLTGTCPNR
CFAFDQFGPL LKRPGFVRAA PTQTGTTRTR QPSAPPTLQR QGRR