| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2122 |
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| Symbol | |
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| ID | 3905512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2489625 |
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| End bp | 2492840 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637879457 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_481223 |
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| Protein GI | 86740823 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.510059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.895505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGACA GCATCAATGC GTTCATGATC TTCGGTCCTC TGGAGATCAT TCTCAAAGGA
GAGATCATCT CGATTGAGTC CGGAAAGCTC CGCACCCTGC TGGCAGCCCT CCTGCTGGAC
GCGGGCAGCG TCGTCGGCTC CGATCGGCTG ATCGACTGGT TGTGGGACGA CCACCAGCCA
GCGAACCCGC GGGGAGCGCT ACACACGTAC ATTCGGCGGC TCCGTCAGCT CCTGGGCGAC
CCGAAGATGC TGAGCACTGT CAGTAGCGGC TACCGCCTGA ACCTCGGGAC GGCGGTCCTG
GACCTGCAGC AGTTCCGCCG GCTGATCAGG GGGGCCGAGG AGACGGCGGA CCCGCAGGCT
CAGGCGAAAC TGCTGACCGA CGCGCTGGCG ATCTGGCGCG GCCCCGCGCT GGCCGACGTG
CCCTCCGAGT CCCTGCGCCG GGAGAAGGGC GCGGCGCTGG AGGAGGAAAG GATGTCCGCG
CTGGAGTCCC GCTTCGAGCT CGAGGTGCGC TTGAACCGAG CCGCCCAGAT TGTCCGCGAG
ATCCGCCTCG CGGCTATCGA CAATCCCTAT CGGGAGAAGT TCTGGGAGCT GCTGATGCTG
GCCCTGTACC GGGCCGGCCG GCAGGCCGAG GCACTGGACG TCTACCAGCA GGTGCGCACG
CTGCTGGTAG ACGAGCTCGG CATCGAGCCC GGCAGCGGCC TGCGGGACCT GCACGGGCGG
ATCCTCGAGT CCGACCCGCA GCTGTGCCTG CCGGATCGGT CCGCACCCGA CGCGGCGACG
CCGTCCACAG TGCCGGCCCA GCTCCCCGCC GACGCGATCG GGTTCGTCGG CCGGCAGGAG
CTGATGGACC AGCTCACCGA GGCCTTGCGC CCGTCTGGGA CGCGCCCGGG CGTACCGGTC
GTCGTGTTGT GCGGGCCGCC CGGAATCGGC AAGACGGCGC TGGCTGTAAG TCTCGGCCAC
CGGTTGCGGC CAGCGTTCCC GGACGGGCAG CTGTACGTCA ACCTGCGCAG CCACGAGCGG
CTCGGCCAGG ACCCGCCGCT CACTCCGGAG CATGTGCTGC CGCAGTTCCT ACGCAGCCTC
GGCGTTCCGC CGGGCCAGAT CCCGGTCGAG CTGGCCGAGC AGGCGAACCT GTTCCGATCG
AAGGTCGCCG GCCGACACGT GCTGGTGATG CTCGACAACG CCTCGAGCAT TGACCAGGTG
ATGCCGCTGT TGCCCGGCGA CGCCGGTTGC TCCGTCATCA TCACCAGCCG ACGGCACCTG
GGTGGCCTGG TCGCCACGCT GGGCGCGCAG GTCGTCCAAG TGGGCACTCT GAGCCCCGAG
GAGTCCCGCG AGCTCGTCGA GGGCATGTTG CGCAACGTCG CTGTCCCGGT GGATCCTGCG
CTGATTCCGG AGGTGGTGGC GCTGTGTGCG TATCTCCCCC TCGCCCTGCG CATCGCCGCC
GCCAATCTGA TCAGTTTCCC GGGCGGCCAC GCCGACGAAT ACGTGGACAG CCTGCGCACG
GGCAACCGGC TGGCGGCGCT TACCGTGGAC GACGACCCGG TCTCGGCGGT GTCCAACGCC
TTCGCGCTGT CCTACGACTC GGTCGGGCCG GACGATCGCC GGTTGTTCAG CCTGGCCGGG
CTCTTCCCCG GGCCCGACTT CTCGGCCAAT GCCGTCGCTG TCCTGGCAGA CATGAGCACA
GCCCAGACCC GCAACTCGTT GAACAGGCTC ACGGTGGCGA ACCTGCTGCA GCAGCAGGCG
CCCGGCCGGT ACCAGTTTCA CGACCTGCTG CGGGAATACG CTTACAAGCG GGCAGGCGAC
CATTTCACTG CCCAGGAGAT AGCGGCGGCA GTGGACCGTC TCGGCCTGTG GTACCTGGTC
GGCACGAGAA ACGCGGTGGA TATCCTGCAC GTGGAGTTCC TCCGGCTCCC GCTGCCGCCA
GAAACACGCT CCGTGATCGA CGCGCCGGAA TTCGTCGACG AGAGCCAGGC GATGGCCTGG
CTGCTCGCGG AGTGGCGCAA CGTCCTTGCT TGTATGCGCG CGCTCGACGG TTCCTGTTCA
AGCCATCTGA CCTGGCATCT TTCCGATGCG CTCCGCGGGT TCTTCTGGAC CGGAAGATAT
CGGACTGAAT GGTCGGAGGC GGCGCACGGC GGTCTGATTG CGGCCGGTCG GAGTAAGGAC
AAGCTCGGCA TGGCCGCGAT GCACCGCAGT CTCGCCAACC TGTATAACAC GCTAGGTGAC
TATCGTCAGG CGATAAACCA CCTTGCTGAA AGTGTCGCCC TGCACACCGA CCTCGGCATG
TCCGAGGAGG TGGCCGCCAT CCTGAACAAC CTCAGTCTCG CCCATCTGAG TCTCAGCCAG
GTCGATCAGG CCGAGCGCAT CGGGCAGGAG GCCTTGGCGA TCGCCCGGGA AGTCGGGTCC
CCGCGGACCG AGGCCGCCGC GCTTGGACTA CTCGGCCAGA TCCACTGGGC TCAGGGCGAC
ATGACTGTGG CCACGATCTA CATCACGTCG TCGCTGCGGG CCGCCGGCGA GCTCGGGCTG
CATCACATCA CCTCGTACAG CCTGAGGAAC CTGGGCCTGG TACGTGAGGC GTTGGGAGAT
CTGGACGCTG CGAAGTCCTG CTTCTCCCAG GCTCTTGAGG TCTCCACGCG TATCGACTCC
TTCTACGACC GGAGCATCTC GCTCTACGGG CTCGCGCTGG TGCACCACGA TGTCGGTGAC
AACCAGGCCG CGCTTGAGTT CGCCGAGCAG GCGCTGGGCG CCTTCCAGGA GTGCGGTGAC
CGGACCTTTG AGGCGGAGAC CCTCTGCATC ATGTCGGGGA TCAACGCCGA GCGCGGGGAC
TGGACCGCAT CCATCCAGTG CGCCCGGCAG GCATTCGAAC GGGCAAACGC CATCGACTAC
ACCGACGGGA AGGCCTACTC GCTCGTCCGG ATCGCGCTCG CGGACGACCA CTTCGGCCGT
GCCGCCGCCG CGGCGCTGCA CGCGGCAGAC GCCTTCGCCC TGGTGGCCGG CACCAACCGG
ATCACTCAGC GCAGGATCCT GGTAGACCTC GGGCTGATGT ACGCCGAGCA GCAGGAGTTC
GAGCGAGCCA CCGAATGCGC ACAACGCCTG CGCACCATCT CGGAGGAGAC CGGGCAGCTT
CTGGGCGCGG CCGAGGCGAA AAGGATTATG GCCCTGGTCA CGCGCCGGTC GAACCTTTTG
CCATCCGCCG AACCCCTCCG GAACGAAGCG TCGTAG
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| Protein sequence | MVDSINAFMI FGPLEIILKG EIISIESGKL RTLLAALLLD AGSVVGSDRL IDWLWDDHQP
ANPRGALHTY IRRLRQLLGD PKMLSTVSSG YRLNLGTAVL DLQQFRRLIR GAEETADPQA
QAKLLTDALA IWRGPALADV PSESLRREKG AALEEERMSA LESRFELEVR LNRAAQIVRE
IRLAAIDNPY REKFWELLML ALYRAGRQAE ALDVYQQVRT LLVDELGIEP GSGLRDLHGR
ILESDPQLCL PDRSAPDAAT PSTVPAQLPA DAIGFVGRQE LMDQLTEALR PSGTRPGVPV
VVLCGPPGIG KTALAVSLGH RLRPAFPDGQ LYVNLRSHER LGQDPPLTPE HVLPQFLRSL
GVPPGQIPVE LAEQANLFRS KVAGRHVLVM LDNASSIDQV MPLLPGDAGC SVIITSRRHL
GGLVATLGAQ VVQVGTLSPE ESRELVEGML RNVAVPVDPA LIPEVVALCA YLPLALRIAA
ANLISFPGGH ADEYVDSLRT GNRLAALTVD DDPVSAVSNA FALSYDSVGP DDRRLFSLAG
LFPGPDFSAN AVAVLADMST AQTRNSLNRL TVANLLQQQA PGRYQFHDLL REYAYKRAGD
HFTAQEIAAA VDRLGLWYLV GTRNAVDILH VEFLRLPLPP ETRSVIDAPE FVDESQAMAW
LLAEWRNVLA CMRALDGSCS SHLTWHLSDA LRGFFWTGRY RTEWSEAAHG GLIAAGRSKD
KLGMAAMHRS LANLYNTLGD YRQAINHLAE SVALHTDLGM SEEVAAILNN LSLAHLSLSQ
VDQAERIGQE ALAIAREVGS PRTEAAALGL LGQIHWAQGD MTVATIYITS SLRAAGELGL
HHITSYSLRN LGLVREALGD LDAAKSCFSQ ALEVSTRIDS FYDRSISLYG LALVHHDVGD
NQAALEFAEQ ALGAFQECGD RTFEAETLCI MSGINAERGD WTASIQCARQ AFERANAIDY
TDGKAYSLVR IALADDHFGR AAAAALHAAD AFALVAGTNR ITQRRILVDL GLMYAEQQEF
ERATECAQRL RTISEETGQL LGAAEAKRIM ALVTRRSNLL PSAEPLRNEA S
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