| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2117 |
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| Symbol | |
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| ID | 3905507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2483462 |
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| End bp | 2484322 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637879452 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_481218 |
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| Protein GI | 86740818 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.115712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.273152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAACG TCCTGGCAGC GCCTCCGACG CTGTCTGACC GGCCCGCGCC GCGTCTCGTC
GCCCGCGCGT CGACGATCCT GCTCACTGGC ATCCTCCTGG TGATCGCCCT GGCGGTGACG
GCACCGGGGA TCCTCACGGG CGCCTCGCCG ACCGTCGTCG ACCCGTCAGG CGTGCTGGCA
GCGCCGAGCG GCTCGCACTG GTGTGGGACC GACCAGCTCG GGCGGGACGT GTGCGCCCGG
GTGCTGCATG GTGCCCGGGC GTCCCTGCTG CTCGGCGTCG GCTCCGTCGC GCTGGCCGTG
GGGATCGGTG CGGCTCTGGG CCTCGCGGCG GCGCTCGGCG GGCGCCTCGT CGACCTGGTG
CTCACCCGGG TGATGGATGT GCTGATCGCG ATACCCCCGT TGATGCTCGC CCTCCTGGTC
ATCGCGGTGC TCGGGCCCGG CAGCGGCAGG ACCATGATTG CCACGGTGGT GGCGCTGACG
CCTCTGTACG GCCGCCTCGT CCGCGCCGAG GCGATGGTCG CCCGCCGAGC GGGTTACGTC
GAGGCGGCCC GCGGACTCGG CGTCGGCCGG ATGGCGCTGG TCGTGCGCCA CGTGCTGCCA
AACGCGCTCG GTCCGGCGCT GGCGCTGGCG ACCACGGGGG TCGGCTCGGC CATCGTGTAC
GTGGCGGGGC TGAGCTTCCT CGGGTTGGGC CCGCAGCCCT CCACCGCGCA GTGGGGTCTG
ATGCTGGCGG AAGGCCGGGA CTTCCTACGG TCCGCGTGGT GGGTCGGGGT GTGCCCGGGT
GCGGCGCTCG CGCTGACCGT GCTCGCCGTC CAGGCCGCCG GCCGCCGGGC CCAGCAGCGG
CTTGTCCGGC GCGGCGGATG A
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| Protein sequence | MTNVLAAPPT LSDRPAPRLV ARASTILLTG ILLVIALAVT APGILTGASP TVVDPSGVLA
APSGSHWCGT DQLGRDVCAR VLHGARASLL LGVGSVALAV GIGAALGLAA ALGGRLVDLV
LTRVMDVLIA IPPLMLALLV IAVLGPGSGR TMIATVVALT PLYGRLVRAE AMVARRAGYV
EAARGLGVGR MALVVRHVLP NALGPALALA TTGVGSAIVY VAGLSFLGLG PQPSTAQWGL
MLAEGRDFLR SAWWVGVCPG AALALTVLAV QAAGRRAQQR LVRRGG
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