| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2099 |
|---|
| Symbol | |
|---|
| ID | 3905626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2465598 |
|---|
| End bp | 2467010 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637879434 |
|---|
| Product | tetratricopeptide TPR_4 |
|---|
| Protein accession | YP_481200 |
|---|
| Protein GI | 86740800 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCAC ATCGCGCGAC AGAGCACCCC GGATGGAACC CCTCTATGCT CCGCCGGCAT
CGGCTTCAGT ACGGGCTCAC CCTTCCCACG CTCGCCGAAC GCATCCGCAA TATCGACGTC
GACAGCGCCC GTGAACGAAG CTTCACCCCG CCACTGGCGA CCGCCGAAGT CATCGGCAAG
CACGAACGCG GGCAGACCTA CCCCGGCGCC GACTACCGCG CCAGCTACCG GCACATCTTC
GGCACTGGAG ACGCCGACCT GGGATTCCGC CACCGGCTCC CCGCCGAGCA CGCCCAGACG
ACTCCGCAGC AGGCCGACTC TCCCAGTGAC CGGGCCGCGT CCTCTCCGCC GCCTTACTCT
GGAGACATCG GCGGGTACAC CGCTTCACGC CCGCCCGATA CCGACGGGCC GGAGAGGCGG
ATCATGACCG AATCAGAAGA GGCGTTTAAC TTCCTGGTCA ACGCCGAACG GGCCGCGGCT
CGACCGGAAG TTCTCGACTT CCTCCACCAA CAGGTACGCA GCCTCGCCAT CGCGTTCCCG
ACCGAGGCGA CGAACCTTGT AGGCCCGCTA CTCGACGCAC AGCGCGTCGC CTTCAGACTC
CTGGACGGCC CAACTCCGCC AGACCAGGCC CGGGACCTCT ACTTTCTCGC AGCAATCACC
TCCGGCCTCC TCGCCCGCGC AGGAGTCGAC CTCAGCCAGC ACACAACCGC CGACATCTAC
GCCCGCGTCG CCTACCTGTG CGCCGACCGG GCAGATCATC CCGGCCTGCG CATCTGGGTA
CGCACCGAAC AGGCCCGCGC CGCCTACTGG ACAGGGGCAC CACACGAGGC ACTGCGCTAC
ATCGAAGCAG CCGAAGCAGA CGTCCACCTC GTTCACGGCA CGGCAGCGAT AGAGACCGCC
GTACAGGCAG CCCGTGCCCA TGCGGCACTC GGCGACAGCG CACAGGCCCA TGCCGCCATC
ACGCGAGCCG TAGACCTCCG CGAGCGGACC CGTCCCGACG ACCTGGACGA GATCGGGGGT
GAACTCTCCA CCCCGGTAGC CGTCCAACTG TTCATCGCAT CCGATGCCCT TACCCGACTC
CCCGAGGACC CACGCGCCGA GCAGGCAGCC ATGGACGCCG TGGAAGCCTT CGCCGCCGCA
GGTAACGCCA GCTACGGCAG CCGAGCCGGG GCCCACATCA ACCTCGCTCT GGCTCGCACC
CGCCGGGGTG ACGTCGACGG CGCCCAAGAC GCCCTCCGGC CCGTCCTAGC CATCCCAGCC
CAGCGCCGCA ACCACGGGAT CCGCACCCTC ATGCAGCGCA TTCAAGGTGC GCTGACCGAC
CAGCGGTACG GACGATCGCC GCAGGCACTC GACATTGCAG CCGAGGTCGA GAACTACTGC
CAGGTGACCC CGACAACCCG GATCCCCGAG TAG
|
|---|
| Protein sequence | MTPHRATEHP GWNPSMLRRH RLQYGLTLPT LAERIRNIDV DSARERSFTP PLATAEVIGK
HERGQTYPGA DYRASYRHIF GTGDADLGFR HRLPAEHAQT TPQQADSPSD RAASSPPPYS
GDIGGYTASR PPDTDGPERR IMTESEEAFN FLVNAERAAA RPEVLDFLHQ QVRSLAIAFP
TEATNLVGPL LDAQRVAFRL LDGPTPPDQA RDLYFLAAIT SGLLARAGVD LSQHTTADIY
ARVAYLCADR ADHPGLRIWV RTEQARAAYW TGAPHEALRY IEAAEADVHL VHGTAAIETA
VQAARAHAAL GDSAQAHAAI TRAVDLRERT RPDDLDEIGG ELSTPVAVQL FIASDALTRL
PEDPRAEQAA MDAVEAFAAA GNASYGSRAG AHINLALART RRGDVDGAQD ALRPVLAIPA
QRRNHGIRTL MQRIQGALTD QRYGRSPQAL DIAAEVENYC QVTPTTRIPE
|
|---|
| |