| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2088 |
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| Symbol | |
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| ID | 3905615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2455071 |
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| End bp | 2457560 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879423 |
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| Product | recombinase |
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| Protein accession | YP_481189 |
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| Protein GI | 86740789 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.929661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGGC TGTCGAAGAT CACCGCGTCG CATCGGTCCC GGGTGGCGGT GGTCTACCTG
CGGCAGTCGA CGCTGGTGCA GGTGCGGGAC AACACCGCCT CCACGGTGCG GCAGTACGGC
CTGGTGGACA CGGCCGTGGA GCTGGGCTGG GACCGCGAGA ACGTGCGGGT GATCGACGCG
GACCTGGGGG TGTCGGGGAC GTTCGGTGCC GACCGCGAGG GCTTCCGCGA CCTGGTGGCC
CAGGTGTGTC TGGGCGAGAT CGGGGCGATC TTCGGGTTGG AGGTGTCCCG GCTGGCCCGC
TCGTCGGCGG ACTTCGCCCG CCTGCTGGAG TTGGCCCGTC TGACGGATGC GCTGCTGGTG
GACGCCGACG GTGTCTACGA TCTCGCGGAC ATCAACGACC GCCTCCTGCT CGGGCTGAAG
GGCAGTATGT CCGAGTGTGA GCTGCACCTG CTGACGGGCC GGCTGCAGGG CGCGAAACGG
GCCGCGGCCG AACGCGGCGA GCTGCGTTTC CCGCTGCCGG TCGGCTACGT CTACGACGAC
GAGGGTGTCT GCGTGATCGA CCCGGATCAG GAGGTGCAGG GGGCCATCCG GGACGTCTTC
GCCGCGTTCG CCGCGGGCGG CTCGGCGTTC CAGGTGGTGG CCGCGTTCGT TCGGCGGCGG
TTCCCGCTGC GGGCCTATGG GGGGATCTGG GCCGGGCAGT TGCGATGGGG CCGGCTGACG
CACTCCCGGG CGCTGGGGGT GCTGTCCAAC CCGTGCTATG CGGGCACCTA CGTCTACGGC
CGGTACGCCA CCTGCCGGAC GGTGCGCCCG GACGGCACCG TGCACACCGG GGTGCGGCTG
CGCCCGCGCG AGCAGTGGCC CGTGGTGCGC CACGGCCACC ACGAGAGCTA CATCAGCTGG
GAGGAGTATG TGGCCATCGA GGCGAGGCTT TCGGCCAACT GCACCCACCA GGGGGCCCGC
CCGGCGCGGG AGGGCCTGGC CCTGTGCCAG GGGATCATGT TCTGCGGGTC GTGCGGGCGG
CCGATGACCA CCCGCTACTA CCCACAGGGG CGGGCGGCCT ACGGCTGCTC GTCGTCGCGC
GCCGACCACG AGGCCACGCC CACCTGCCGG TCGATCCGCG CCGACGTCGT CGACGACGCG
GTGGCCGGCC TGCTACTGGC CACGGTGTCG CCGGGGCAGA TCGAACAAGC CCTGGCCGCC
GCGGACGAGG TCACCTCCCG GCACACCCGC GCCCACCGCG CGGCCGAGCT GGCCGTGGAA
CGCGCCCGCT ACGACGCCGA CCGCGCCGAG CGGGCGTTGG GCGCGGTGGA GCCGGAGAAC
CGGCTGGTCG CCCGCACCCT GGAGACCCGC TGGGAAGCCA GACTGTCCGC CTTGGCCGAA
GCCGAGGCCG CCCTGGCCGC TGTCCGGGAG CGCAGGCCGG CGCTGCCGGA CCGGGACGGC
CTGCGCGCAC TGGCCGCGGA CCTGCCCGGA CTCTGGCACA ACCCGCACAC CCGGGACCGG
GACCGCAAGC GGCTGCTGCG CACCCTCATC TCGGACGTCA CCCTGCTGCC CGAGACCGAC
CGGGCCCGCG CCCGGCTTGG GGTGCGCTGG CACACCGGCG CCACCGACGA ACTCGCCCTG
CGCAGACCGG CCACCTCGCC ACAGGTGCGC AGGACCCCGG CCCCGGCCCG CCAGCTGATC
GCCCGGCTCG GCCCGGACCA TTCCGACGCC GAGATCGTCA CCGCACTCGC CGACGCCGGG
CTGACCACCG CAACCGGCCG TCCCTACGAC GAAGCGGCCG TCGCCTGGGT CCGCCACGCC
TTCCACATCC CCGGCCGGTG TCCGTTCCGG GACGGGGAGA TCTCCGTCGA CCAGGTCGCG
GCGACCCTCG GGATCACCGC CAACGCCGTC TACTACTGGC TCACCCACGA CCGGCTGGCC
GGCCGCAAGG ATCTCTCCGG ACGCTGGTGC ATCCCCTGGA ACGCCCAGGT CGAGGCCGCC
TGTCGCCGCC AGATCGACGC CTCCGGCCAC CTCATCCCCC GCACCCCCGG CCCCCGTGAG
GTCCTGCCCG GCGACGTCAC CGTCCACGAG GCCGCCACCC GGCTCGGCGT GCCCGACGAC
GTCGTCTACT ACCGCATCCG TATCGGCCAG CTGACCGCGC GGCGCACCCC GAGCGGGTGC
CTGAGCCTCC CGTGGAACCC GCAGGCCGAG GCCGCCTGCC GCACGCGGAT CGCACATCCC
GGATCCGGCC CGACCGGCCC GGGCAGCCGG CCCCTCCCGC ACGCCGCCAC CGCACACGGA
GACATCAGCG TCCAGCAGGC CGCCACCAGG CTCGGTATCC CCACCGCGCA GGTCTACTAC
TGGATCCGCC GCGGCTACCT GACCGCCTAC CGCCTCAACG CTGGCCGGGT CGCCATCCCC
TGGAACGACC AGGTGGAAAC CGCCTGCCTC CACCGCGCCG CCCGCACCGT GAAAGTCAAC
TCCACAACCC AAACGATCAC AGCGAGATGA
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| Protein sequence | MNGLSKITAS HRSRVAVVYL RQSTLVQVRD NTASTVRQYG LVDTAVELGW DRENVRVIDA
DLGVSGTFGA DREGFRDLVA QVCLGEIGAI FGLEVSRLAR SSADFARLLE LARLTDALLV
DADGVYDLAD INDRLLLGLK GSMSECELHL LTGRLQGAKR AAAERGELRF PLPVGYVYDD
EGVCVIDPDQ EVQGAIRDVF AAFAAGGSAF QVVAAFVRRR FPLRAYGGIW AGQLRWGRLT
HSRALGVLSN PCYAGTYVYG RYATCRTVRP DGTVHTGVRL RPREQWPVVR HGHHESYISW
EEYVAIEARL SANCTHQGAR PAREGLALCQ GIMFCGSCGR PMTTRYYPQG RAAYGCSSSR
ADHEATPTCR SIRADVVDDA VAGLLLATVS PGQIEQALAA ADEVTSRHTR AHRAAELAVE
RARYDADRAE RALGAVEPEN RLVARTLETR WEARLSALAE AEAALAAVRE RRPALPDRDG
LRALAADLPG LWHNPHTRDR DRKRLLRTLI SDVTLLPETD RARARLGVRW HTGATDELAL
RRPATSPQVR RTPAPARQLI ARLGPDHSDA EIVTALADAG LTTATGRPYD EAAVAWVRHA
FHIPGRCPFR DGEISVDQVA ATLGITANAV YYWLTHDRLA GRKDLSGRWC IPWNAQVEAA
CRRQIDASGH LIPRTPGPRE VLPGDVTVHE AATRLGVPDD VVYYRIRIGQ LTARRTPSGC
LSLPWNPQAE AACRTRIAHP GSGPTGPGSR PLPHAATAHG DISVQQAATR LGIPTAQVYY
WIRRGYLTAY RLNAGRVAIP WNDQVETACL HRAARTVKVN STTQTITAR
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