| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2046 |
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| Symbol | |
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| ID | 3904619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2407411 |
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| End bp | 2408898 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637879383 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_481149 |
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| Protein GI | 86740749 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.920452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.502259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCTTA CCCGCACCCT GAGGCGCTAC GCCAAGGAGA TTCCAGACGC CCTGGCGCTG
GCCGATGCCA CCAGGGAGCT CACCTGGCGC GACTTGAGCA TCGAGGTGGA CCGGCTCGGC
GCCTTCATCT GCGCTTCGAC CGACCGCGGC GCCCGCGTGG CGTTCCTCAG CCACAGCCGC
GCGGAACACT TCGTGCTGCT CTTCGCATGC GCGATGAACG GGCGGACCTT CGTTCCCCTG
AATCCGAACC TGACCACGCC CGAGCTTGTT CACCAGGTCA GTCTGGTGAC GCCCTCGCTG
GTCTTCCACG AGGCGGCCAC CGACAAGTCC GCGGCGCTTC TGGTGGACAA ACTGGACTGG
GTTCGCGCCC GGGACGTCGA TGACGTCCCC GACGCCCGGC CGACTGCCCC GGCCCTGCTG
CGGCTGGAGG ATCCCGCCGT CATCTTTTTC ACCTCGGCGA CGACCGGGCG GCCGAAGGGC
GTGCAGGTCC CTGAGCGTTC CCTGCGGGCG AACTCGGTCG GATGGCAGGG CGATGTTCTC
GAGAGGTACC CGGACGCACG TTTCCTCAGC GCCTGCCCGC TTTACCACGG CAGCTCCGTC
ATAGCGCTCG ACTACCTCAG CAACGGACGC CCCGTCCATA TCATGCGGAG CTTCAACCCT
CGTTCATGGC TTCGCGCCGT CAAGAGGAAC CAGATCAGCC ACAGCTTTCT CGTCCCATCG
ATGATCACGC TTCTCATGAA GGTGTCGCAG CTGGACCGGT CGGAGACCGA GTCGCTCGTG
CTGCTGGCCC ATGGCGCCGC TCCTATGCCC TCGAAGCTTG CCGAGGAGGC GCGCGACCGG
CTGGGGGTCG ATCTGTTCAG TGTCTACGGC ATAACCGAAG GCGGCGGACC AGCAATCGTG
GGCACGCTCC CACCGAGCCT CATCGGGCCG TTCCCCGGCG CCACATATCT TGGCTTTCCG
CTGAAGGGGA TGATCGCGCG GGTCCTCGAT GACGAGGGAC GACCGGCGCC GCCAGGCCAC
GCGGGCGAGA TCGCCCTGCG CGGAGACGGT CTGATGACGC AGTACTGGCA TGACCCAGGA
GCCACCACCC AGTCGATCGT CGACGGCTGG CTCCGCACGC ACGACGTCGG GGTCCAGGAT
GACGAGGGCG TCTACTGGAT CCTCGACCGG CGCACTGATC TGATCATTCG TGGCGGTCAG
AACGTCTACC CCGCCGAAGT AGAAGCAGTC GTTCGCACGG CGCCAGGAGT GCGGGACGCC
GCGGTCGTCG CGGCACCGTC GACCATTTGG GGCCAGACAC CGGTCGCGTA CGTCGTCCCC
ACCGAGCAGG GCTCCACGAG CGAGGCCGAC ATCGTCGGCT GGTGCGCGGG CCGGCTCGCC
AGCTACAAGA CCCCGACGCA GGTTATCTTC ATCCCCGAGT TGCCCGTCGG GCCCTCCGGA
AAGGTCTTAC GTCGTGCGCT ACGAAAGTTC GAGAACGGTG TCCGCTGA
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| Protein sequence | MWLTRTLRRY AKEIPDALAL ADATRELTWR DLSIEVDRLG AFICASTDRG ARVAFLSHSR
AEHFVLLFAC AMNGRTFVPL NPNLTTPELV HQVSLVTPSL VFHEAATDKS AALLVDKLDW
VRARDVDDVP DARPTAPALL RLEDPAVIFF TSATTGRPKG VQVPERSLRA NSVGWQGDVL
ERYPDARFLS ACPLYHGSSV IALDYLSNGR PVHIMRSFNP RSWLRAVKRN QISHSFLVPS
MITLLMKVSQ LDRSETESLV LLAHGAAPMP SKLAEEARDR LGVDLFSVYG ITEGGGPAIV
GTLPPSLIGP FPGATYLGFP LKGMIARVLD DEGRPAPPGH AGEIALRGDG LMTQYWHDPG
ATTQSIVDGW LRTHDVGVQD DEGVYWILDR RTDLIIRGGQ NVYPAEVEAV VRTAPGVRDA
AVVAAPSTIW GQTPVAYVVP TEQGSTSEAD IVGWCAGRLA SYKTPTQVIF IPELPVGPSG
KVLRRALRKF ENGVR
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