Gene Francci3_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2038 
Symbol 
ID3906755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2399581 
End bp2400405 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID637879375 
Producthypothetical protein 
Protein accessionYP_481141 
Protein GI86740741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.694865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCT ATAACTGGGA TCTCATCGAC CCTAGGATCG AGGAGATTCG TCGAAAGATC 
GACAAAGAGC GGTCGGGGAT CATCGACCAT CCCATCTACA GCTGCATGCG GACGCTGGAC
GACGTGCAGG TCTTCATGGA AAGCCATGTG TTCGCCGTCT GGGACTTCAT GTCGTTGCTC
AAGTCGCTCC AGGCAGAGCT CACCTGCGTG GATATCCCGT GGGTTCCCCG GGGCCGGGCC
GCCGGCCGGC GGCTCATCAA CGACATCGTC CTGGTCGAGG AGAGCGACGA GCTCCTCGGC
GGCTTCACCA GCCACTTCGA GCTCTACCTT GGCGCGATGG AGGAGGCCGG TGCCGACACC
TCGCGGATCA AGGAGTTCCT TCAGCTGATC TCGGACGGGA CCGAGGTGCC TGCCGCGCTG
GTCGCCGCCG AGGCCCCCGC TCCGGCCGCC GGTTTCGTTC GCTGGACCTG GGATCTCGTT
ACCAACGCCC CGGCCCACAG CCAGGCCGCC GCGTTCGCTT TCGGCCGGGA GGACCTCATC
CCGGACATGT TCGACCACGT CATCCGCGCC AACGCCGATG AGCCACGGCT GCGCACCTTC
CGGGACTACC TCGTCCGCCA CATCCAGGTG GACGGCGAGG AGCATACCCC TATGGCGATG
CAGATGCTGG TCGACCTCTG CGGCCAAGAC GACCGTTTGT GGGCGGAATG CACCCGAACC
ACGATGGACG CGCTGCGTGC CCGCAACCAG CTGTGGACCG GCATCGCCCT GGCCGTCGAG
GGATCTCGGC TCTGTCCCGG CGACGAGCCC GTGCCCGCGG GCTAA
 
Protein sequence
MSRYNWDLID PRIEEIRRKI DKERSGIIDH PIYSCMRTLD DVQVFMESHV FAVWDFMSLL 
KSLQAELTCV DIPWVPRGRA AGRRLINDIV LVEESDELLG GFTSHFELYL GAMEEAGADT
SRIKEFLQLI SDGTEVPAAL VAAEAPAPAA GFVRWTWDLV TNAPAHSQAA AFAFGREDLI
PDMFDHVIRA NADEPRLRTF RDYLVRHIQV DGEEHTPMAM QMLVDLCGQD DRLWAECTRT
TMDALRARNQ LWTGIALAVE GSRLCPGDEP VPAG