Gene Francci3_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2013 
Symbol 
ID3906729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2364603 
End bp2365106 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content72% 
IMG OID637879349 
Productphosphoenolpyruvate synthase/pyruvate phosphate dikinase-like 
Protein accessionYP_481116 
Protein GI86740716 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.576485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCGG AGCGCCTGGG GGCGGGACCG TCACCGGCCA GCCCCCCGCT GTCCGGCGTG 
CAACCAGCCA TCGAAGGGAT CGCCATCCCG GGCGATCTCG CGGCGGCGAT CATCCGCGCG
CTCGCCCAGC TCGGCGGGCA AGCCGCGTAT GCCGTCCGGT CCAGTGCGAC GGCAGAGGAC
CTGCCGTCGG CCTCCTTCGC CGGCCAACAG GACACGTACC TGAACGTCGT GGGGCCGGCG
GCGATCCTCC AGCACGTCAG CCGGTGCTGG GCCTCGCTGT TCACCGAGCG GGCCGTGACC
TACCGCCAGC GCAACGTTGC CGGCCCCGAG GTCTTCGCGC TCGACGAACT GGGCAAGATC
ACCCTTGCCG CCCACGGTGA CCATCGCACC GCCGTCACCG ACAACAGCGC CGGCATGTTC
GCCGCCGCCT CGGGCGACGC CCTCATCGCC AAGGACGGCG CCGCCATCGC CAGGACCACC
TATCGAGAGT GGCTCGCGCG CTGA
 
Protein sequence
MVAERLGAGP SPASPPLSGV QPAIEGIAIP GDLAAAIIRA LAQLGGQAAY AVRSSATAED 
LPSASFAGQQ DTYLNVVGPA AILQHVSRCW ASLFTERAVT YRQRNVAGPE VFALDELGKI
TLAAHGDHRT AVTDNSAGMF AAASGDALIA KDGAAIARTT YREWLAR