| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1998 |
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| Symbol | |
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| ID | 3903706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2348170 |
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| End bp | 2349399 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879334 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_481101 |
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| Protein GI | 86740701 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.469724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTC CGTCCTCCAA CCGTACGGCC TCCGGCACCC GCCGCGGACT GGCGACGGAG
GCGGTGCGTG CCGGCCATCG CCAGTCCGTT GACGACCAGC ACAGCGAGGC GCTGGTACTC
ACGTCGAGCT ACCTGTTCGA CGACTCGCAC GACGCGGCGG AGAAGTTCGC GCAGCGGCGC
CCCGGCAACG TCTACGTCCG GTTCACGAAC CCGACGGTGC GCGCGTTCGA GGAGCGCGTC
GCGCGGCTGG AGGGTGCCGA GTCCGCCGTA GCGACCGCGT CCGGGATGGC CGCATTCTTG
GCGGTGTCGC TCGGGCTGCT GCGCGGCGGG GACCATGTCC TGCTTGCGGA GGGTGTCTTC
GGCACCACGA CCCGGCTCTA TGCTCACTAT CTGGACCGGT TCGGCGTCAT GACGACCGTC
GTTCCGGTGA CCGACCCGGC CGCCTGGGCG CGCGCAATGC GTGCGCAGAC CAGGATGCTC
GTCGTTGAGA GCCCCACGAA CCCGGTAATG GCCGTGGCCG ACATCAGGTA CCTCGCAGAG
CTCGCACATG CCGCCGGCGC GCTGCTGCTG GTCGACAACA CCCTGTGCAC CCCGGTGTTC
CAGCAACCGA TCGTGTTTGG CGCAGACCTC GTTCTGCACT CCGCCGGCAA GTACATCGAC
GGTCAGGGCC GCTGCGGCGG CGGCGTTGTC GCCGGCCGCG CGGGCCTGAT CTCCGAGCTG
CACGGTGTGC TGCGCACCGC GGGCCCGAGC CTCAGCCCGT TCAACGCGTG GATCTTCCTG
AAGAGCCTGG AGACGCTGCC GGTGCGGATG CGGGCGCACG ACGCCAACAC GGCGGTGGTG
GCTGCCTGGC TAGCCGACCA ACCGGACGTA CGGGCGGTGC ACTACACCGG CAGCGCGGAT
CACCCGCAGC GGGAGCTGGT AGCCGCCCAA CAGTCCGGGC ACGGCGGAGT GATCAGCTTC
GAGCTGTACG GCGGCCAGCA GGCCAGCTGG TCGTTTGTCG ACCGGCTTGA GCTCGTGTCG
AACACGACAA ACATCGGGGA CACCAAGTCG ATGATCACCC ATCCGGCAAG CACCACCCAC
GGCCGGCTCA CGCCGGCACA GCGCGACTCC GCCGGCGTCA CCGACGGCCT GCTGCGCCTA
TCGGTCGGCC TGGAGGACGT CGAGGACATC GTCGCCGATC TGGCCCGGGC GTTCGCAGCG
ACCAGGCCTG CCGGGGCCCG CGCCCGATGA
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| Protein sequence | MTPPSSNRTA SGTRRGLATE AVRAGHRQSV DDQHSEALVL TSSYLFDDSH DAAEKFAQRR
PGNVYVRFTN PTVRAFEERV ARLEGAESAV ATASGMAAFL AVSLGLLRGG DHVLLAEGVF
GTTTRLYAHY LDRFGVMTTV VPVTDPAAWA RAMRAQTRML VVESPTNPVM AVADIRYLAE
LAHAAGALLL VDNTLCTPVF QQPIVFGADL VLHSAGKYID GQGRCGGGVV AGRAGLISEL
HGVLRTAGPS LSPFNAWIFL KSLETLPVRM RAHDANTAVV AAWLADQPDV RAVHYTGSAD
HPQRELVAAQ QSGHGGVISF ELYGGQQASW SFVDRLELVS NTTNIGDTKS MITHPASTTH
GRLTPAQRDS AGVTDGLLRL SVGLEDVEDI VADLARAFAA TRPAGARAR
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