| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1958 |
|---|
| Symbol | |
|---|
| ID | 3904320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2299424 |
|---|
| End bp | 2300476 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637879295 |
|---|
| Product | integrase |
|---|
| Protein accession | YP_481062 |
|---|
| Protein GI | 86740662 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGG CCTGCGAGTT AACGGGCCGG TCGCGGGCGA CGTTCTACCG GCGTCATCGT
CCGCCGGCTT CGGTGCCGCC GCGGCCGGTC CCGAAGCCGC ACCGGGAGCG GGTCCAGCCG
CGGGCGTTGT CCGCGCGGGA GCGGGAACGG GTGCTGGAGG TGTTGAACTC GGAGCGGTTC
CGGGACGCCT CGCCGGCGCA CGTGTGGGCG ACTCTGCTCG ACGAGGGGGG CTACCTGGCG
TCGTGGCGGA CGTTCTACCG GATCCTGGCC GCGGCGGGGC AGACCGGGGA GCGCCGCGCC
CAGGCGTCGC ACCCGTCGCA CGTGAAGCCC GAGCTGCTCG TGTGCGCACC GAACCAGGTG
TGGACGTGGG ACATCACCAA GCTCAAGGGC AGGTCGAAAC ACGAGTACTA CTACCTGTAC
GTCATTCTCG ACGTCTACAG CCGGTATGTC GTGGGCTGGC TGCTTGCGCC GAACGAGTCC
GGGGAACTCG CGAAGGAGCT GGTCAGCCAG ACGTGCGAGA AGTACGGCGT CGACACGTCG
GGGCTGACGG TGCACGCCGA CCGTGGCTCG TCGATGACGT CGAAGACCCT CGCGCTGCTG
CTGGCCGACC TCGACATCGT CCGGTCGCAT TCCAGACCGC GGGTCTCGAA CGACAACCCG
TTCTCCGAAT CGCAGTGCAA GACGTTGAAG TACCGGCCCG AGTTCCCTGA CCGTTTCGAC
TCGATCGAGC AGGCACGCCG GTTCTGCCGT GGGTTCTTCA CCTGGTACAA CACCGCGCAC
AAGCACTCCG GGATCGGCTA TCTCTCGCCG GCGGCCGTCT ACTTCGGCCT GGCCGGGCAG
GCGCACGCCG CGCGGGCCCG GGTGCTTGAC GCGGCCTACG CCGCGCACCC GGAGCGGTTC
GTGAACCGGC GGCCGGTCCC GCCGCCGCTG CCGAAGCCCG CCGGGATCAA CACGAAGCCC
GACGACCAGG CCGAGCCGGT CACCGACGGT GCCCCCGAAC GATCGGAGGT CATCCCTCGA
CAGAGATCGA AACAGGGATC GAACGCAGGC TAG
|
|---|
| Protein sequence | MKKACELTGR SRATFYRRHR PPASVPPRPV PKPHRERVQP RALSARERER VLEVLNSERF
RDASPAHVWA TLLDEGGYLA SWRTFYRILA AAGQTGERRA QASHPSHVKP ELLVCAPNQV
WTWDITKLKG RSKHEYYYLY VILDVYSRYV VGWLLAPNES GELAKELVSQ TCEKYGVDTS
GLTVHADRGS SMTSKTLALL LADLDIVRSH SRPRVSNDNP FSESQCKTLK YRPEFPDRFD
SIEQARRFCR GFFTWYNTAH KHSGIGYLSP AAVYFGLAGQ AHAARARVLD AAYAAHPERF
VNRRPVPPPL PKPAGINTKP DDQAEPVTDG APERSEVIPR QRSKQGSNAG
|
|---|
| |