Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1932 |
Symbol | |
ID | 3904294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2271821 |
End bp | 2273593 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879269 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_481036 |
Protein GI | 86740636 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.333973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACATTC TGCGGGTGCC CGGAGGTACT GAGCTGCCCG CCGACCGAGG GCTGGCCGCC GCCGTCCTTA CTGAGGTCGC CATGGTCGCC GACCGGCCGG TTCTGGCCCA TCAGGTGGAC GGAGGCTGGC GCGATGTGAC CGCGGGCCGG TTCTGCTTCG ACGTCGCGGC CGTCGCCAGG GGCCTGGTGG CGCACGACGT CGGGGTTGGC GACCGGGTTG CGATCATGGG TCGGACCGGT TACGGCTGGG CCGTTGCCGA CTTCGCGATC TGGAGCATCG GCGCGGTCAC CGTCCCCGTC TACCCGACCT CCTCGGCCCA CCAGGTCGAC CACATCATCG GTGACTCCAA GGCCTCGTGG TGCTTCGTCG AGACACCCGA CCACGAGCGC CTGGTCCTGT CAGCGGGTCT TCCCGCGACG CGCGTCTGGT CGCTGGACGA GGCCGTGTCG GCACTCGGCA CCGCCGGTCA GTCCGTCGCG GAGTCCGAGG TGCTCCGCCG CCGGGACGCG GTCCGGGCCG ACGACCTCGC GACAATCGTC TACACCAGCG GGACGACCGG CGTGCCGAAG GGCTGCCTGC TGACCCACGC GAACGTCTTC TCCGCCGCCG TCAACTCGGT GGAGCGGCTG GACCCGGTGA TGCGTCCGGC CACCGGCTCG GCCAGTACCA TTCTTTTCCT TCCGCTCTCG CACGTGTTCG GGCGTGTGAC CATGATCGGG TGTCTGTGGG CCGGAGTGCG GACGGCCCTG CTGCCGGACC CCGGGGGCCT CGTCCCGGCG CTGCGCACCT TCCGCCCCAC CTTCCTGATC ACCGTTCCGT CGGCGCTGGA GAAGATGCGC AAGGGCGCGC GGGCGGCGGC GGCGGGCGGA CTCTCGGGGC GCCTGTTCGC CGCGGCCGAA CGGACCGCCT GCGTGCTGGG TCGGGCCCGG CGTGGGCAGG GCGGCCTGGG GCTCGTCACG CGGCTTCAGG CTCCGCTGTT CGACCGGCTG GTGTACCGCC GGTTGCGCGC GGCGTTCGGC GGGCGCCTGC GCCACGTCGT GTGCGGGGGA GCGACGCTCG ACCCCTCCAC CGCCGAGTTC CTCACCGGGG TCGGGGTGCA CGTCCTCGGC GCCTACGGGC TGACCGAGGC CTCGACGGCC GTCAGCATCA GCGCTCCCGG GCTCGACCGG CCGGGCAGCA CGGGCCGTCC GCTGCCGGCG ACCACCGTCG CGATCAGCGA CGAGGGCGAG GTCCTGGTGG CTGGGCCGCA GGTCTCGCCG GGCTACTGGC CGGATCGGAC GGGCGCGCAC GAGCCGTGGT TGCGCACCGG TGACCTCGGT CGGCTCGACG ACGACGGGTA TCTCCACATC ACCGGTCGAA TCAAGGAGAT CATTATCACC ACCGGGGGGA AGAACGTCTC GCCGGCACCG CTGGAGGACC GCATCCGGCT GCACCCGCTG GTCAGCAACG CCATAGTGAT CGGGGAGAAC CGGCCGTTCG TGACGGCCCT CGTGACCCTC GATCGGGCCG CCGTGCAGGC CTGGGCCCGG CGAGGCGGTC ACAAGCTGGA CGAGGCCGCC GCCCACACCG ACCCTCGGCT GGTCGCCGAG GTCAGCGCCG CGGTCGACGC GGCGAACGCG CAGGTCTCGC GGGCCGAGTC GGTGCGGAAG TTCCGCCTCC TGAGCCACGA CTTCACCATC CAGGGCGGCC AGCTCACCCC GTCGTTGAAG CTTCGCCGTG CCGTGATCGA GGAGGAGAAC GCCAAGGAGA TCGAGGAGCT GTACGCGTCC TGA
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Protein sequence | MNILRVPGGT ELPADRGLAA AVLTEVAMVA DRPVLAHQVD GGWRDVTAGR FCFDVAAVAR GLVAHDVGVG DRVAIMGRTG YGWAVADFAI WSIGAVTVPV YPTSSAHQVD HIIGDSKASW CFVETPDHER LVLSAGLPAT RVWSLDEAVS ALGTAGQSVA ESEVLRRRDA VRADDLATIV YTSGTTGVPK GCLLTHANVF SAAVNSVERL DPVMRPATGS ASTILFLPLS HVFGRVTMIG CLWAGVRTAL LPDPGGLVPA LRTFRPTFLI TVPSALEKMR KGARAAAAGG LSGRLFAAAE RTACVLGRAR RGQGGLGLVT RLQAPLFDRL VYRRLRAAFG GRLRHVVCGG ATLDPSTAEF LTGVGVHVLG AYGLTEASTA VSISAPGLDR PGSTGRPLPA TTVAISDEGE VLVAGPQVSP GYWPDRTGAH EPWLRTGDLG RLDDDGYLHI TGRIKEIIIT TGGKNVSPAP LEDRIRLHPL VSNAIVIGEN RPFVTALVTL DRAAVQAWAR RGGHKLDEAA AHTDPRLVAE VSAAVDAANA QVSRAESVRK FRLLSHDFTI QGGQLTPSLK LRRAVIEEEN AKEIEELYAS
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