Gene Francci3_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1912 
Symbol 
ID3906861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2246245 
End bp2247249 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID637879250 
Producthypothetical protein 
Protein accessionYP_481017 
Protein GI86740617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.225812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.715311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGCT TGCGCAACCA GACCACCGGC CTGCTGGTCT GGTGGGTCGA GGTGCTGATG 
CTGGTGATCC TGTACTACTC CTACACCGGC ACCCGTGCCG TGGCCGACGC CTCCACCGGC
GAGGCGATGC GGATGGGCCA CGATCTCCTG CGCCTGGAGA CCTTCCTGCA TCTCGATCCC
GAGCTCGGGC TCAACCGCTG GTTGCAGAGT GTACCGGTGC TGGCGGTCGT CTGTTGTTAC
TACTACGCGA CGCTGCACTT CGTCGTGACG CCGGCCCTGC TGGTGTGGAT GCATCGTCGG
CACCCCCCCC GGTACGCTCA GGCCCGCTGG ACGCTGGTGA TCACCACTCT GATCTGCCTG
GTCGGGTTCT TCCTGTTCCC GACCGCCCCG CCCCGGTTGC TCACCGGCAC GTCCTATGTC
GACACCATGT CCCACTTCGA GGGCTGGGGA TGGTGGAGCG GTAGCGCGAG CGCCGCCCCG
GACGGGCTGG AGGGACTGAC GAACCAGTAC GCCGCGCTCC CGTCGCTGCA CTGCGCATGG
TCGTTGTGGT GCGGTTTCCT GCTGGTGCGC TTCGGGCGCC GACCGCTGGT CCGGGTACTC
GGCGCGCTTT ATCCGGCGGC GACCCTGTTC GTCGTCATGT CGACGTCGAA CCACTATCTC
CTGGACGCGG TCGCCGGATG GGCGGTCCTG GGCGGCGCCG CCGGTGCGGT CGCGCTCGTC
GCCGGGTGGC GGTCCCGGGT CGGTTTCGTG GGGAGTGCCG CTGGGCAGCC GGCCGTGCCG
GGAGCCGGAT CGCAGCTTGC GCCGAACGCG CTGGCACCGG TGTCCGTGCC ACTGCCGTCT
CCGCCGCCGT CTTCACTGGC GCCGCCGCCG TCTTCACTGG CGCCGCCGCC GTCTTCACTG
GCGCCGCCGC CGTCACCGGT GCCTCCGCCC GCCCCGCCGG CCACCTCCAG CATGGCGATG
CGGGTCACAC CGGTGGCGCG AGCCGATGGA GCGCACGCGA ACTGA
 
Protein sequence
MRRLRNQTTG LLVWWVEVLM LVILYYSYTG TRAVADASTG EAMRMGHDLL RLETFLHLDP 
ELGLNRWLQS VPVLAVVCCY YYATLHFVVT PALLVWMHRR HPPRYAQARW TLVITTLICL
VGFFLFPTAP PRLLTGTSYV DTMSHFEGWG WWSGSASAAP DGLEGLTNQY AALPSLHCAW
SLWCGFLLVR FGRRPLVRVL GALYPAATLF VVMSTSNHYL LDAVAGWAVL GGAAGAVALV
AGWRSRVGFV GSAAGQPAVP GAGSQLAPNA LAPVSVPLPS PPPSSLAPPP SSLAPPPSSL
APPPSPVPPP APPATSSMAM RVTPVARADG AHAN