Gene Francci3_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1904 
Symbol 
ID3906853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2236911 
End bp2237723 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content76% 
IMG OID637879242 
Producthypothetical protein 
Protein accessionYP_481009 
Protein GI86740609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0586421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTACGG TAGGCAATGT GCTTCCCGCC CTGTCAGCGT CGCCCCGGTC CGGAGTCCTC 
ACCGGATGGG GCAATGCGTG GCTTGCCGGG CTCGTCGGGC TCGACGACGT CATCACCCAG
ATGCACCGCG CGCTCGGTGG CGAGGCGGCG CCGCACACCC TCGGCGACGA GCCGCTCGTG
CTGGGCCTGG GAGCCCTGCG TTCGGCCGGA GCGCAACGGC TCCGGCTGGT CCTGCCCGCC
CCCGGGGACG CCACCGGCCT GCCCGGCCCG GCGGAGGTGA ACAGGGACGC GATCACCGCC
GGAGAGGCGA TCATCGTGAT CGGCCCGAAC CCGCCGCTGG TGCTCGTCCC CGGGGTCGTC
GTGCACGGGC CGGCCCTGGA GGGGCGGCTG GAGTCGGTGC ACTGGCGGGT GCTCGTCGCG
TCCCGCGTGC CACCGCCCGG AGCCGGCCTG CGCGCCGCGG AACACGACCT CAGCAACGCG
ATCCGCACCA CGACGGCCGC GCTCATCGAC CTCGACATCG CAAGCGCCCG CCCCGAGGTG
CTCGCCCTGC TGCGCGACCG CGGGGTGGAT GACCCGGGCC CGGGGCTGGG CCCGGGCCAT
CCACCGGGGG CGCACGCCCT GCTGGCCCGG GCGGAGCGGT TGTCGACCCT GCTCGACCTC
GCCGCCCGGG ACGACGGTGC CGCGGTGACC GCGAGCGAGA TCGCCCGCAG GTCCGCGGCG
CTGCGCAACC TTTCCGCGGC GGTGCGTCGC GCCTATGCGG CGGCCTACGA CGCCTTCGAC
CCGACGTATG CCCCCGTGCC GCCCTCGAAC TGA
 
Protein sequence
MPTVGNVLPA LSASPRSGVL TGWGNAWLAG LVGLDDVITQ MHRALGGEAA PHTLGDEPLV 
LGLGALRSAG AQRLRLVLPA PGDATGLPGP AEVNRDAITA GEAIIVIGPN PPLVLVPGVV
VHGPALEGRL ESVHWRVLVA SRVPPPGAGL RAAEHDLSNA IRTTTAALID LDIASARPEV
LALLRDRGVD DPGPGLGPGH PPGAHALLAR AERLSTLLDL AARDDGAAVT ASEIARRSAA
LRNLSAAVRR AYAAAYDAFD PTYAPVPPSN