Gene Francci3_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1896 
Symbol 
ID3906845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2230254 
End bp2230547 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content77% 
IMG OID637879234 
Producthypothetical protein 
Protein accessionYP_481001 
Protein GI86740601 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0138471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGA TGATCCGAGT TCAGCCGGGC GCCGGGCGGA CCGCGGTGGG CGGCCGGCGC 
GAGGACCCGC TGCACGGCCC GCTGCTGATC GTCCGGGTCA CCGAGCCTGC CGTCGACGGC
CGGGCCACCG AAGCCGCCCT GCGGGCCCTG TGCGCGGCGC TGCGGGTGCG CCGGGGAGAT
GTCCGGCTGG TCCGCGGCGC GACCGGCCGG GTCAAGGCCG TCGAGGTCGA GGTGGCAGCG
GTCGACGAGC CCGCGCTCCG GATCCGGATC GACGAGCTCG GCCGGGACGG CTGA
 
Protein sequence
MRLMIRVQPG AGRTAVGGRR EDPLHGPLLI VRVTEPAVDG RATEAALRAL CAALRVRRGD 
VRLVRGATGR VKAVEVEVAA VDEPALRIRI DELGRDG